RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ZNF736B4DX44 427 aaPredicted RBP14.41□□□□□ -0.1
USHBP1-203ENST00000431146 SCGNO76038 276 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 CHRM2P08172 466 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 MELTFP08582 738 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 CELA3BP08861 270 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 HIST1H1DP16402 221 aaKnown RBP14.41□□□□□ -0.1
USHBP1-203ENST00000431146 CXCL3P19876 107 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 WNT5AP41221 380 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 ALDH3B1P43353 468 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 KIR2DL2P43627 348 aaPredicted RBP14.41□□□□□ -0.1
USHBP1-203ENST00000431146 RBP2P50120 134 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 RBMS2Q15434 407 aaKnown RBP14.41□□□□□ -0.1
USHBP1-203ENST00000431146 GUSBP1Q15486 140 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 NKPD1Q17RQ9 610 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 ACSF3Q4G176 576 aaPredicted RBP14.41□□□□□ -0.1
USHBP1-203ENST00000431146 GLRX2Q9NS18 164 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 ZNF629Q9UEG4 869 aaPredicted RBP14.41□□□□□ -0.1
USHBP1-203ENST00000431146 ZNF816-ZNF321PA0A0X1KG74 233 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 GFRA3O60609 400 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 AMY2AP04746 511 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 HOXB1P14653 301 aaPredicted RBP14.4□□□□□ -0.1
USHBP1-203ENST00000431146 PRKACAP17612 351 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 APLNRP35414 380 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 EIF2S3P41091 472 aaKnown RBP14.4□□□□□ -0.1
USHBP1-203ENST00000431146 PLEKHN1Q494U1 663 aaPredicted RBP14.4□□□□□ -0.1
USHBP1-203ENST00000431146 CD163Q86VB7 1156 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 BATF2Q8N1L9 274 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 BHLHE23Q8NDY6 225 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 OR56B1Q8NGI3 324 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 APOBEC3DQ96AK3 386 aaPredicted RBP14.4□□□□□ -0.1
USHBP1-203ENST00000431146 REPIN1Q9BWE0 567 aaKnown RBP14.4□□□□□ -0.1
USHBP1-203ENST00000431146 DCAF16Q9NXF7 216 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 ING3Q9NXR8 418 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 DKK4Q9UBT3 224 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 ZNF222Q9UK12 451 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 LHX6Q9UPM6 363 aa14.4□□□□□ -0.1
USHBP1-203ENST00000431146 SSNA1O43805 119 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 HTR3BO95264 441 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 RLN1P04808 185 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 GABRR1P24046 479 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 BLVRBP30043 206 aaPredicted RBP14.39□□□□□ -0.11
USHBP1-203ENST00000431146 MRPL21Q7Z2W9 205 aaKnown RBP14.39□□□□□ -0.11
USHBP1-203ENST00000431146 OR52B4Q8NGK2 314 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 DEDD2Q8WXF8 326 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 PAPOLGQ9BWT3 736 aaKnown RBP14.39□□□□□ -0.11
USHBP1-203ENST00000431146 IFT46Q9NQC8 304 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 ZNF581Q9P0T4 197 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 GHRLQ9UBU3 117 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 MALLQ13021 153 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 RSU1Q15404 277 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 SCGB2B2Q4G0G5 96 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 LHFPL2Q6ZUX7 228 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 CCDC28AQ8IWP9 274 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 TCTE3Q8IZS6 198 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 SLC30A7Q8NEW0 376 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 NANOS1Q8WY41 292 aaKnown RBP14.39□□□□□ -0.11
USHBP1-203ENST00000431146 WNT2BQ93097 391 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 ZNF75AQ96N20 296 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 SLC6A7Q99884 636 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 BOLA1Q9Y3E2 137 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 SPTBN4Q9H254 2564 aa14.39□□□□□ -0.11
USHBP1-203ENST00000431146 IGKV1-12A0A0C4DH73 117 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 IGKV1D-12P01611 117 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 TPOP07202 933 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 ZNF735P0CB33 412 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 VSIG10L2P0DP72 767 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 CBX5P45973 191 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 SPATA46Q5T0L3 261 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 NOXA1Q86UR1 476 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 SPACA3Q8IXA5 215 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 BPIFB2Q8N4F0 458 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 FAM89BQ8N5H3 189 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 NUDT16L1Q9BRJ7 211 aaKnown RBP14.38□□□□□ -0.11
USHBP1-203ENST00000431146 C1QTNF6Q9BXI9 259 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 CHST6Q9GZX3 395 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 SLC7A11Q9UPY5 501 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 A0A1B0GUH1 482 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 MFNGO00587 321 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 CD74P04233 296 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 HRH1P35367 487 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 FUT6P51993 359 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 MAB21L1Q13394 359 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 CD276Q5ZPR3 534 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 GLDNQ6ZMI3 551 aaPredicted RBP14.38□□□□□ -0.11
USHBP1-203ENST00000431146 Q6ZT83 130 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 CDH24Q86UP0 819 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 CALHM1Q8IU99 346 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 CAPSLQ8WWF8 208 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 RADILQ96JH8 1075 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 METTL9Q9H1A3 318 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 ZNF69Q9UC07 566 aa14.38□□□□□ -0.11
USHBP1-203ENST00000431146 FOXI3A8MTJ6 420 aaPredicted RBP14.37□□□□□ -0.11
USHBP1-203ENST00000431146 LILRA1O75019 489 aa14.37□□□□□ -0.11
USHBP1-203ENST00000431146 CSTBP04080 98 aaKnown RBP14.37□□□□□ -0.11
USHBP1-203ENST00000431146 SERPINA5P05154 406 aa14.37□□□□□ -0.11
USHBP1-203ENST00000431146 GSTP1P09211 210 aaKnown RBP14.37□□□□□ -0.11
USHBP1-203ENST00000431146 IDH3GP51553 393 aaPredicted RBP14.37□□□□□ -0.11
USHBP1-203ENST00000431146 UBE2NP61088 152 aaKnown RBP14.37□□□□□ -0.11
USHBP1-203ENST00000431146 MRPS15P82914 257 aaKnown RBP14.37□□□□□ -0.11
USHBP1-203ENST00000431146 PRDX4Q13162 271 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms