RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 CNN3Q15417 329 aaKnown RBP12.11□□□□□ -0.47
HOXC4-202ENST00000430889 PABPC1L2AQ5JQF8 200 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 C11orf88Q6PI97 169 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 C3P1Q6ZMU1 363 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 LINC00696Q6ZRV3 163 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 LHFPL2Q6ZUX7 228 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 OR13G1Q8NGZ3 307 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 WBP1Q96G27 269 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 FER1L6-AS2Q96M78 137 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 FXYD6Q9H0Q3 95 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 C5orf66Q9H5L9 145 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 IL36GQ9NZH8 169 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 KLF13Q9Y2Y9 288 aaPredicted RBP12.11□□□□□ -0.47
HOXC4-202ENST00000430889 NOP16Q9Y3C1 178 aaKnown RBP12.11□□□□□ -0.47
HOXC4-202ENST00000430889 LOC100509620A0A075B734 347 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 ZNF587BE7ETH6 402 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 SLC25A4P12235 298 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 MPGP29372 298 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 MEOX1P50221 254 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 MTCP1P56278 107 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 ARF1P84077 181 aaKnown RBP12.1□□□□□ -0.47
HOXC4-202ENST00000430889 CAMK2BQ13554 666 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 AADACL3Q5VUY0 350 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 RTL6Q6ICC9 239 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 PLXDC2Q6UX71 529 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 TUSC5Q8IXB3 177 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 ZFP62Q8NB50 900 aaPredicted RBP12.1□□□□□ -0.47
HOXC4-202ENST00000430889 SUMF1Q8NBK3 374 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 OR5H2Q8NGV7 314 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 MARVELD3Q96A59 401 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 GSX2Q9BZM3 304 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 METTL9Q9H1A3 318 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 ACKR4Q9NPB9 350 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 PARPBPQ9NWS1 579 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 MCTS1Q9ULC4 181 aaKnown RBP12.1□□□□□ -0.47
HOXC4-202ENST00000430889 HSF4Q9ULV5 492 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 DNAJC13O75165 2243 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 IGKV1-12A0A0C4DH73 117 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 RRP8O43159 456 aaKnown RBP12.1□□□□□ -0.47
HOXC4-202ENST00000430889 XRCC2O43543 280 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 SS18L1O75177 396 aaPredicted RBP12.1□□□□□ -0.47
HOXC4-202ENST00000430889 FARS2O95363 451 aaKnown RBP12.1□□□□□ -0.47
HOXC4-202ENST00000430889 SYNGR4O95473 234 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 NRASP01111 189 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 IGKV1D-12P01611 117 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 COX5BP10606 129 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 AMY2BP19961 511 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 FPR2P25090 351 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 FOXG1P55316 489 aaPredicted RBP12.1□□□□□ -0.47
HOXC4-202ENST00000430889 SNU13P55769 128 aaKnown RBP12.1□□□□□ -0.47
HOXC4-202ENST00000430889 SOX8P57073 446 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 TAS2R46P59540 309 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 GMFBP60983 142 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 IL13RA1P78552 427 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 SRYQ05066 204 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 ARFRP1Q13795 201 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 OVCH2Q7RTZ1 564 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 PXT1Q8NFP0 134 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 FNDC9Q8TBE3 224 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 EMG1Q92979 244 aaKnown RBP12.1□□□□□ -0.47
HOXC4-202ENST00000430889 CPNE2Q96FN4 548 aaPredicted RBP12.1□□□□□ -0.47
HOXC4-202ENST00000430889 PHB2Q99623 299 aa12.1□□□□□ -0.47
HOXC4-202ENST00000430889 RTBDNQ9BSG5 229 aaPredicted RBP12.1□□□□□ -0.47
HOXC4-202ENST00000430889 IGKV1D-8A0A087WSZ0 117 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 A0A0B4J2A0 478 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 OR5H14A6NHG9 310 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 CCSO14618 274 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 GALR2O43603 387 aaPredicted RBP12.09□□□□□ -0.47
HOXC4-202ENST00000430889 IGHV3-9P01782 118 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 TMEM225BP0DP42 221 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 RPS2P15880 293 aaKnown RBP12.09□□□□□ -0.47
HOXC4-202ENST00000430889 RBP2P50120 134 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 PRSS12P56730 875 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 C6orf201Q7Z4U5 140 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 OR5AP2Q8NGF4 316 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 OR6K3Q8NGY3 331 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 CITED4Q96RK1 184 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 S100A13Q99584 98 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 SHPKQ9UHJ6 478 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 KIF25Q9UIL4 384 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 LIPGQ9Y5X9 500 aa12.09□□□□□ -0.47
HOXC4-202ENST00000430889 ZNF816-ZNF321PA0A0X1KG74 233 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 ZNF503-AS2A6NEH8 195 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 SPRY1O43609 319 aaPredicted RBP12.08□□□□□ -0.48
HOXC4-202ENST00000430889 ANGPTL7O43827 346 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 RP2O75695 350 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 ACTL6AO96019 429 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 CHATP28329 748 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 P2RX3P56373 397 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 SUPT4H1P63272 117 aaKnown RBP12.08□□□□□ -0.48
HOXC4-202ENST00000430889 FGL1Q08830 312 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 SPEM2Q0P670 501 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 DAZAP2Q15038 168 aaPredicted RBP12.08□□□□□ -0.48
HOXC4-202ENST00000430889 TRIP6Q15654 476 aaKnown RBP12.08□□□□□ -0.48
HOXC4-202ENST00000430889 TMEM128Q5BJH2 165 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 ATP1A1-AS1Q5TC04 95 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 RPUSD3Q6P087 351 aaKnown RBP12.08□□□□□ -0.48
HOXC4-202ENST00000430889 TECTBQ96PL2 329 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 SLX1AQ9BQ83 275 aa12.08□□□□□ -0.48
HOXC4-202ENST00000430889 MFFQ9GZY8 342 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms