RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CHD3Q12873 2000 aaKnown RBP9.31□□□□□ -0.92
CHD4-202ENST00000430771 TRAV1-2A0A0B4J238 106 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 CLDN25C9JDP6 229 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 J3QT63 122 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 GABARAPO95166 117 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 F12P00748 615 aaPredicted RBP9.31□□□□□ -0.92
CHD4-202ENST00000430771 IGHV4-39P01824 125 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 GRPP07492 148 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 SRMP19623 302 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 ZNF93P35789 620 aaPredicted RBP9.31□□□□□ -0.92
CHD4-202ENST00000430771 POU3F4P49335 361 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 MTCP1P56278 107 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 ZNF181Q2M3W8 571 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 FAM76BQ5HYJ3 339 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 GLT8D1Q68CQ7 371 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 HAGHLQ6PII5 290 aaPredicted RBP9.31□□□□□ -0.92
CHD4-202ENST00000430771 ANKRD13BQ86YJ7 626 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 CDH26Q8IXH8 852 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 JAGN1Q8N5M9 183 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 OR10Z1Q8NGY1 313 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 FOXRED1Q96CU9 486 aaPredicted RBP9.31□□□□□ -0.92
CHD4-202ENST00000430771 ORAI1Q96D31 301 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 BCL7BQ9BQE9 202 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 FAM192AQ9GZU8 254 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 FGF23Q9GZV9 251 aaPredicted RBP9.31□□□□□ -0.92
CHD4-202ENST00000430771 OR51I2Q9H344 312 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 METTL17Q9H7H0 456 aaPredicted RBP9.31□□□□□ -0.92
CHD4-202ENST00000430771 CHODLQ9H9P2 273 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 GCM1Q9NP62 436 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 UFSP2Q9NUQ7 469 aa9.31□□□□□ -0.92
CHD4-202ENST00000430771 SETXQ7Z333 2677 aaKnown RBP9.3□□□□□ -0.92
CHD4-202ENST00000430771 AKAP6Q13023 2319 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 IGHV3-64DA0A0J9YX35 117 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 LOC100289279A0A1B0GTE1 492 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 CDC14BO60729 498 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 MPZP25189 248 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 MTNR1BP49286 362 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 PDLIM4P50479 330 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 PSMD7P51665 324 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 DSCR9P59020 149 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 KISS1Q15726 138 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 CARTPTQ16568 116 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 DMRTC1Q5HYR2 192 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 CLEC2AQ6UVW9 174 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 PEG10Q86TG7 708 aaKnown RBP9.3□□□□□ -0.92
CHD4-202ENST00000430771 SATL1Q86VE3 508 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 SCCPDHQ8NBX0 429 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 OR52N4Q8NGI2 321 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 ZNF671Q8TAW3 534 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 RAB2BQ8WUD1 216 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 RPL3LQ92901 407 aaKnown RBP9.3□□□□□ -0.92
CHD4-202ENST00000430771 TMIGD2Q96BF3 282 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 TIMD4Q96H15 378 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 S100A13Q99584 98 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 UQCC2Q9BRT2 126 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 TMEM106BQ9NUM4 274 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 C1orf123Q9NWV4 160 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 RNF7Q9UBF6 113 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 NPTNQ9Y639 398 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 ABCA12Q86UK0 2595 aa9.3□□□□□ -0.92
CHD4-202ENST00000430771 DYSFO75923 2080 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 IGKV1-27A0A075B6S5 117 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 NDUFS8O00217 210 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 CDIPTO14735 213 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 SSX4O60224 188 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 NDUFS7O75251 213 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 PLATP00750 562 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 RAB3BP20337 219 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 IL24Q13007 206 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 BLMHQ13867 455 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 MPPED2Q15777 294 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 SPRNQ5BIV9 151 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 Q5PR19 223 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 GPR107Q5VW38 600 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 WDR82Q6UXN9 313 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 LRRTM1Q86UE6 522 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 TPRA1Q86W33 373 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 CLVS1Q8IUQ0 354 aaPredicted RBP9.29□□□□□ -0.92
CHD4-202ENST00000430771 MKXQ8IYA7 352 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 Q8IYB0 196 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 SAXO1Q8IYX7 474 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 ZSCAN4Q8NAM6 433 aaPredicted RBP9.29□□□□□ -0.92
CHD4-202ENST00000430771 OR5D18Q8NGL1 313 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 ZNF420Q8TAQ5 688 aaPredicted RBP9.29□□□□□ -0.92
CHD4-202ENST00000430771 LRRC29Q8WV35 223 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 TNFAIP8L1Q8WVP5 186 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 AQP3Q92482 292 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 CCL17Q92583 94 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 YIPF5Q969M3 257 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 RFT1Q96AA3 541 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 SPACA5Q96QH8 159 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 PIMREGQ9BSJ6 248 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 CENPOQ9BU64 300 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 PPIL3Q9H2H8 161 aaKnown RBP9.29□□□□□ -0.92
CHD4-202ENST00000430771 SMURF1Q9HCE7 757 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 USF3Q68DE3 2245 aa9.29□□□□□ -0.92
CHD4-202ENST00000430771 ANKRD17O75179 2603 aaKnown RBP9.29□□□□□ -0.92
CHD4-202ENST00000430771 SRRM5B3KS81 715 aa9.28□□□□□ -0.92
CHD4-202ENST00000430771 RP2O75695 350 aa9.28□□□□□ -0.92
CHD4-202ENST00000430771 LY6HO94772 140 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms