RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 LHX4Q969G2 390 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 RAB40ALP0C0E4 278 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 TAS2R60P59551 318 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 ARF6P62330 175 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 C1orf220Q5T0J3 134 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 RHBDD2Q6NTF9 364 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 OR2L13Q8N349 312 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 ABHD3Q8WU67 409 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 TMED6Q8WW62 240 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 RAB40AQ8WXH6 277 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 SEH1LQ96EE3 360 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 ZNF768Q9H5H4 540 aaKnown RBP11.86□□□□□ -0.51
CDK12-201ENST00000430627 FKBP11Q9NYL4 201 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 LNP1A1A4G5 178 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 HIST1H1CP16403 213 aaKnown RBP11.86□□□□□ -0.51
CDK12-201ENST00000430627 KIR2DS2P43631 304 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
CDK12-201ENST00000430627 MEOX2P50222 304 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 FAM27D1Q5T7N8 215 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 ZNF534Q76KX8 674 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 CALHM3Q86XJ0 350 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 C20orf196Q8IYI0 205 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 C8orf46Q8TAG6 207 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 CABLES2Q9BTV7 478 aa11.86□□□□□ -0.51
CDK12-201ENST00000430627 A0A1W2PPE3 182 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 NKX2-6A6NCS4 301 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 LANCL1O43813 399 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 CCL3P10147 92 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 NKAIN4Q8IVV8 208 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 C16orf92Q96LL3 132 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 PILRBQ9UKJ0 227 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 PRELID1Q9Y255 219 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 LYRM1O43325 122 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 URB1O60287 2271 aaKnown RBP11.85□□□□□ -0.51
CDK12-201ENST00000430627 TRAT1Q6PIZ9 186 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 OR8I2Q8N0Y5 310 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 NEURL3Q96EH8 262 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 IL21Q9HBE4 155 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 ACER3Q9NUN7 267 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 TRAPPC4Q9Y296 219 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 CLDN14O95500 239 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 NTF3P20783 257 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 DDOSTP39656 456 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 INPP5JQ15735 1006 aaPredicted RBP11.85□□□□□ -0.51
CDK12-201ENST00000430627 ANKRD55Q3KP44 614 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 LMO3Q8TAP4 145 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 CHRDL1Q9BU40 450 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 SLC7A10Q9NS82 523 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 EPOPA6NHQ4 379 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 TAPBPO15533 448 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 ZNF266Q14584 549 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 BCDIN3DQ7Z5W3 292 aaKnown RBP11.85□□□□□ -0.51
CDK12-201ENST00000430627 PELI3Q8N2H9 469 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 NECAP1Q8NC96 275 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 OR2G3Q8NGZ4 309 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 LILRB4Q8NHJ6 448 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 SFT2D1Q8WV19 159 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 PARP12Q9H0J9 701 aaKnown RBP11.85□□□□□ -0.51
CDK12-201ENST00000430627 SPEF2Q9C093 1822 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 OR3A1P47881 315 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 CEBPDP49716 269 aaPredicted RBP11.85□□□□□ -0.51
CDK12-201ENST00000430627 ZNF117Q03924 483 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 Q6ZNB5 142 aa11.85□□□□□ -0.51
CDK12-201ENST00000430627 PDLIM5Q96HC4 596 aaKnown RBP11.85□□□□□ -0.51
CDK12-201ENST00000430627 CIB3Q96Q77 187 aaPredicted RBP11.85□□□□□ -0.51
CDK12-201ENST00000430627 ACAA2P42765 397 aaKnown RBP11.84□□□□□ -0.51
CDK12-201ENST00000430627 C3orf36Q3SXR2 165 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 CCL13Q99616 98 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 DDA1Q9BW61 102 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 FOXJ2Q9P0K8 574 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 A0A087WUJ7 227 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 UBE2L5PA0A1B0GUS4 154 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 PLAUP00749 431 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 THY1P04216 161 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 SLC25A4P12235 298 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 CD96P40200 585 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 LYRM7Q5U5X0 104 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 ZNF738Q8NE65 137 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 OR10A7Q8NGE5 316 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 PACRGQ96M98 296 aaPredicted RBP11.84□□□□□ -0.51
CDK12-201ENST00000430627 OR2M2Q96R28 347 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 LOXHD1Q8IVV2 1947 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 NME4O00746 187 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 IGFBP6P24592 240 aaPredicted RBP11.84□□□□□ -0.51
CDK12-201ENST00000430627 LSM11P83369 360 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDK12-201ENST00000430627 DHODHQ02127 395 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 TMEM41BQ5BJD5 291 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 ACTR3CQ9C0K3 210 aaPredicted RBP11.84□□□□□ -0.51
CDK12-201ENST00000430627 BIN3Q9NQY0 253 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 DCAF13Q9NV06 445 aaKnown RBP11.84□□□□□ -0.51
CDK12-201ENST00000430627 PROB1E7EW31 1015 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 GPRIN2O60269 458 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 FAM71E1Q6IPT2 247 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 PTP4A1Q93096 173 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 TMPRSS11DO60235 418 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 ZNF90Q03938 601 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 NT5CQ8TCD5 201 aa11.84□□□□□ -0.51
CDK12-201ENST00000430627 RASL10BQ96S79 203 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms