RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 RIPPLY1Q0D2K3 151 aa14.16□□□□□ -0.14
UBE3D-204ENST00000430071 PRDX4Q13162 271 aa14.16□□□□□ -0.14
UBE3D-204ENST00000430071 DMKNQ6E0U4 476 aaPredicted RBP14.16□□□□□ -0.14
UBE3D-204ENST00000430071 LYPD2Q6UXB3 125 aa14.16□□□□□ -0.14
UBE3D-204ENST00000430071 KRT74Q7RTS7 529 aa14.16□□□□□ -0.14
UBE3D-204ENST00000430071 OR5AK2Q8NH90 309 aa14.16□□□□□ -0.14
UBE3D-204ENST00000430071 RGP1Q92546 391 aaPredicted RBP14.16□□□□□ -0.14
UBE3D-204ENST00000430071 PAPOLGQ9BWT3 736 aaKnown RBP14.16□□□□□ -0.14
UBE3D-204ENST00000430071 SLC22A4Q9H015 551 aa14.16□□□□□ -0.14
UBE3D-204ENST00000430071 UFSP2Q9NUQ7 469 aa14.16□□□□□ -0.14
UBE3D-204ENST00000430071 ZNF816-ZNF321PA0A0X1KG74 233 aa14.15□□□□□ -0.14
UBE3D-204ENST00000430071 DHRS7CA6NNS2 312 aa14.15□□□□□ -0.14
UBE3D-204ENST00000430071 ZNF850A8MQ14 1090 aa14.15□□□□□ -0.14
UBE3D-204ENST00000430071 GMDSO60547 372 aa14.15□□□□□ -0.14
UBE3D-204ENST00000430071 MDH2P40926 338 aaKnown RBP14.15□□□□□ -0.14
UBE3D-204ENST00000430071 SRP9P49458 86 aaKnown RBP14.15□□□□□ -0.14
UBE3D-204ENST00000430071 SPHARQ15513 63 aa14.15□□□□□ -0.14
UBE3D-204ENST00000430071 ZBTB37Q5TC79 503 aa14.15□□□□□ -0.14
UBE3D-204ENST00000430071 PIGCQ92535 297 aa14.15□□□□□ -0.14
UBE3D-204ENST00000430071 ITFG2Q969R8 447 aa14.15□□□□□ -0.14
UBE3D-204ENST00000430071 SMIM19Q96E16 107 aa14.15□□□□□ -0.14
UBE3D-204ENST00000430071 SLC6A7Q99884 636 aa14.15□□□□□ -0.14
UBE3D-204ENST00000430071 TMEM246Q9BRR3 403 aa14.15□□□□□ -0.14
UBE3D-204ENST00000430071 FGF23Q9GZV9 251 aaPredicted RBP14.15□□□□□ -0.14
UBE3D-204ENST00000430071 ESM1Q9NQ30 184 aa14.15□□□□□ -0.14
UBE3D-204ENST00000430071 PNMA8CA0A1B0GUJ8 204 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 J3QLI3 93 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 FOXH1O75593 365 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 GNALP38405 381 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 CD200P41217 278 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 PAX2Q02962 417 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 ACSM1Q08AH1 577 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 DMRTC1Q5HYR2 192 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 KLF17Q5JT82 389 aaPredicted RBP14.14□□□□□ -0.15
UBE3D-204ENST00000430071 TMEM42Q69YG0 159 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 FTMTQ8N4E7 242 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 SPICQ8N5J4 248 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 ITPKCQ96DU7 683 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 COMMD4Q9H0A8 199 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 ENPP5Q9UJA9 477 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 HHLA2Q9UM44 414 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 LRCH1Q9Y2L9 728 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 POLR3KQ9Y2Y1 108 aaPredicted RBP14.14□□□□□ -0.15
UBE3D-204ENST00000430071 NOP16Q9Y3C1 178 aaKnown RBP14.14□□□□□ -0.15
UBE3D-204ENST00000430071 MPC1Q9Y5U8 109 aa14.14□□□□□ -0.15
UBE3D-204ENST00000430071 SOX21Q9Y651 276 aaPredicted RBP14.14□□□□□ -0.15
UBE3D-204ENST00000430071 A8MXK9 166 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 MRPS14O60783 128 aaKnown RBP14.13□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF12P17014 697 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 CELP19835 753 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 TAS2R43P59537 309 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 BDH1Q02338 343 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF154Q13106 437 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 MED22Q15528 200 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 TBCEQ15813 527 aaPredicted RBP14.13□□□□□ -0.15
UBE3D-204ENST00000430071 KCTD21Q4G0X4 260 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 WDR86Q86TI4 376 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 CCDC54Q8NEL0 328 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 HPSE2Q8WWQ2 592 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 OR5P3Q8WZ94 311 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 GHSRQ92847 366 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 FGGYQ96C11 551 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 ADAT3Q96EY9 351 aaPredicted RBP14.13□□□□□ -0.15
UBE3D-204ENST00000430071 PGLYRP3Q96LB9 341 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 INSIG2Q9Y5U4 225 aa14.13□□□□□ -0.15
UBE3D-204ENST00000430071 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.12□□□□□ -0.15
UBE3D-204ENST00000430071 C3orf80F5H4A9 247 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 PTBP3O95758 552 aaKnown RBP14.12□□□□□ -0.15
UBE3D-204ENST00000430071 CD80P33681 288 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 GATA4P43694 442 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 EMX1Q04741 257 aaPredicted RBP14.12□□□□□ -0.15
UBE3D-204ENST00000430071 CEP78Q5JTW2 689 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 CLVS2Q5SYC1 327 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF826PQ6ZT77 177 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 ZDHHC23Q8IYP9 409 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 SPARTQ8N0X7 666 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 BCL6BQ8N143 479 aaPredicted RBP14.12□□□□□ -0.15
UBE3D-204ENST00000430071 CELF2-AS1Q8N7Q2 184 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 SPERTQ8NA61 448 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 OR13C3Q8NGS6 347 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 OR13C5Q8NGS8 318 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 OR8S1Q8NH09 359 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 NANPQ8TBE9 248 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 PLEKHA1Q9HB21 404 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 ACOT13Q9NPJ3 140 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 GPR173Q9NS66 373 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF281Q9Y2X9 895 aa14.12□□□□□ -0.15
UBE3D-204ENST00000430071 PPIAL4EA0A075B759 164 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 PPIAL4CA0A0B4J2A2 164 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 PPIAL4DF5H284 164 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 NRASP01111 189 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 PPIAL4FP0DN26 164 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 GATA3P23771 443 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 HILS1P60008 231 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 RPS11P62280 158 aaKnown RBP eCLIP14.11□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF181Q2M3W8 571 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF404Q494X3 552 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 PLCXD3Q63HM9 321 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 ZNF773Q6PK81 442 aa14.11□□□□□ -0.15
UBE3D-204ENST00000430071 MOB3CQ70IA8 216 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms