RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 CEBPDP49716 269 aaPredicted RBP13.44□□□□□ -0.26
VARS-216ENST00000428445 RAB13P51153 203 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 BMXP51813 675 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 CAV3P56539 151 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 BLMHQ13867 455 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 PLA1AQ53H76 456 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 ZDHHC23Q8IYP9 409 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 OR4M1Q8NGD0 313 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 TEX47Q8TBZ9 253 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 PIFOQ8TCI5 191 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 CFHR4Q92496 578 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 PPP1R14AQ96A00 147 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 NKX3-1Q99801 234 aaPredicted RBP13.44□□□□□ -0.26
VARS-216ENST00000428445 MEGF9Q9H1U4 602 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 OR51I2Q9H344 312 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 ZNF222Q9UK12 451 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 ACOD1A6NK06 481 aa13.43□□□□□ -0.26
VARS-216ENST00000428445 LYNP07948 512 aa13.43□□□□□ -0.26
VARS-216ENST00000428445 COX7A1P24310 79 aa13.43□□□□□ -0.26
VARS-216ENST00000428445 CAPZA1P52907 286 aa13.43□□□□□ -0.26
VARS-216ENST00000428445 LRRC75BQ2VPJ9 315 aa13.43□□□□□ -0.26
VARS-216ENST00000428445 KPRPQ5T749 579 aaPredicted RBP13.43□□□□□ -0.26
VARS-216ENST00000428445 PLBD1Q6P4A8 553 aa13.43□□□□□ -0.26
VARS-216ENST00000428445 DYNAPQ8N1N2 210 aa13.43□□□□□ -0.26
VARS-216ENST00000428445 C11orf42Q8N5U0 333 aa13.43□□□□□ -0.26
VARS-216ENST00000428445 PAPD5Q8NDF8 572 aaKnown RBP13.43□□□□□ -0.26
VARS-216ENST00000428445 OTOSQ8NHW6 89 aa13.43□□□□□ -0.26
VARS-216ENST00000428445 HIST1H2AAQ96QV6 131 aa13.43□□□□□ -0.26
VARS-216ENST00000428445 MEX3AA1L020 520 aaKnown RBP13.42□□□□□ -0.26
VARS-216ENST00000428445 RFPL4AA6NLU0 287 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 B2RBV5 119 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 RFPL4AL1F8VTS6 287 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 H3BN98 237 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 HMGN1P05114 100 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 RAP2AP10114 183 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 CD28P10747 220 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 CCL3L1P16619 93 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 TMEM200BQ69YZ2 307 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 DEGS2Q6QHC5 323 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 MOB3CQ70IA8 216 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 LHFPL4Q7Z7J7 247 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 CD177Q8N6Q3 437 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 DTX3Q8N9I9 347 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 BBS1Q8NFJ9 593 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 OR10G2Q8NGC3 310 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 OR4C13Q8NGP0 309 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 OR2T6Q8NHC8 308 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 GIPC3Q8TF64 312 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 NSL1Q96IY1 281 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 CLPTM1LQ96KA5 538 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 FEVQ99581 238 aa13.42□□□□□ -0.26
VARS-216ENST00000428445 PRR23D1E9PI22 279 aaPredicted RBP13.41□□□□□ -0.26
VARS-216ENST00000428445 PRODHO43272 600 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 ALX3O95076 343 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 PRR23D2P0DMB1 279 aaPredicted RBP13.41□□□□□ -0.26
VARS-216ENST00000428445 ATP6V1B1P15313 513 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 MS4A2Q01362 244 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 SLC35D3Q5M8T2 416 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 ZBTB37Q5TC79 503 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 HAGHLQ6PII5 290 aaPredicted RBP13.41□□□□□ -0.26
VARS-216ENST00000428445 CCBE1Q6UXH8 406 aaPredicted RBP13.41□□□□□ -0.26
VARS-216ENST00000428445 TMEM179BQ7Z7N9 219 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 OR5D13Q8NGL4 314 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 ZNF671Q8TAW3 534 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 FAM81AQ8TBF8 368 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 AQP3Q92482 292 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 TTTY10Q9BZA0 68 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 FAM234AQ9H0X4 552 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 MMP28Q9H239 520 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 LRP12Q9Y561 859 aa13.41□□□□□ -0.26
VARS-216ENST00000428445 PIN1P1O15428 100 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 SYNGR1O43759 233 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 CST1P01037 141 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 MAP2K3P46734 347 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 GNG3P63215 75 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 GINS1Q14691 196 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 CEACAM21Q3KPI0 293 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 ZNF782Q6ZMW2 699 aaPredicted RBP13.4□□□□□ -0.26
VARS-216ENST00000428445 Q6ZS46 218 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 THAP5Q7Z6K1 395 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 CPOQ8IVL8 374 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 MRAPQ8TCY5 172 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 ASB9Q96DX5 294 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 SDSLQ96GA7 329 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 OR5M11Q96RB7 305 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 TEX12Q9BXU0 123 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 ZNF702PQ9H963 129 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 SERTAD4Q9NUC0 356 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 RASL12Q9NYN1 266 aa13.4□□□□□ -0.26
VARS-216ENST00000428445 A0A0U1RQV5 110 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 PRR32B1ATL7 298 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 JUNBP17275 347 aaPredicted RBP13.39□□□□□ -0.27
VARS-216ENST00000428445 GYS2P54840 703 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 PSMA6P60900 246 aaKnown RBP13.39□□□□□ -0.27
VARS-216ENST00000428445 RPL31P62899 125 aaKnown RBP13.39□□□□□ -0.27
VARS-216ENST00000428445 ZNF273Q14593 569 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 LDLRAD2Q5SZI1 272 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 TMEM236Q5W0B7 351 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 KCTD18Q6PI47 426 aaPredicted RBP13.39□□□□□ -0.27
VARS-216ENST00000428445 C11orf88Q6PI97 169 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms