RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 CLEC2AQ6UVW9 174 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 STAC2Q6ZMT1 411 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 HAVCR2Q8TDQ0 301 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 YIPF5Q969M3 257 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 FGGYQ96C11 551 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 SLC22A13Q9Y226 551 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF407Q9C0G0 2248 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 FAM74A7A6NL05 159 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF732B4DXR9 585 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 FAM74A3Q4VXF1 159 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 SLC35D3Q5M8T2 416 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 LRRTM1Q86UE6 522 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 SLC30A7Q8NEW0 376 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 OR5H2Q8NGV7 314 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 EMG1Q92979 244 aaKnown RBP9.44□□□□□ -0.9
TCOF1-204ENST00000427724 LURAP1Q96LR2 239 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 SELENOIQ9C0D9 397 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 GPR173Q9NS66 373 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 TAAR3PQ9P1P4 343 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 STEAP1Q9UHE8 339 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 ZFYVE26Q68DK2 2539 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 A0A1W2PRD5 423 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 A0A1W2PRF3 423 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 A0A1W2PRM7 423 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 MEX3AA1L020 520 aaKnown RBP9.43□□□□□ -0.9
TCOF1-204ENST00000427724 ZFPL1O95159 310 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 MPC2O95563 127 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 TXNDC12O95881 172 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 TUBG1P23258 451 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 HTR2CP28335 458 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 TNFSF10P50591 281 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 FMODQ06828 376 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.43□□□□□ -0.9
TCOF1-204ENST00000427724 OR2AK2Q8NG84 335 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 PTDSS2Q9BVG9 487 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 FAM234AQ9H0X4 552 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 TMEM100Q9NV29 134 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 GFOD1Q9NXC2 390 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 KCNG2Q9UJ96 466 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 HIF3AQ9Y2N7 669 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 TRAV1-2A0A0B4J238 106 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 A0A0B4J2E0 115 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 A0A1B0GX12 115 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 MED19A0JLT2 244 aaPredicted RBP9.43□□□□□ -0.9
TCOF1-204ENST00000427724 PRSS37A4D1T9 235 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 TRIM77I1YAP6 450 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 S100PP25815 95 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 KLF3P57682 345 aaPredicted RBP9.43□□□□□ -0.9
TCOF1-204ENST00000427724 VAMP2P63027 116 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF85Q03923 595 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 AKR1C8PQ5T2L2 129 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 FAM214BQ7L5A3 538 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 OR2M3Q8NG83 312 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 OR14K1Q8NGZ2 314 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 OR4K15Q8NH41 348 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 SCMH1Q96GD3 660 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 PARP12Q9H0J9 701 aaKnown RBP9.43□□□□□ -0.9
TCOF1-204ENST00000427724 METTL9Q9H1A3 318 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 ZFP57Q9NU63 452 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 A0A0J9YW62 118 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF32P17041 273 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 GNLYP22749 145 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 CTSSP25774 331 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 KCNJ3P48549 501 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 CAMLGP49069 296 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 PDZD11Q5EBL8 140 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 PABPC1L2AQ5JQF8 200 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF468Q5VIY5 522 aaPredicted RBP9.43□□□□□ -0.9
TCOF1-204ENST00000427724 OR10K2Q6IF99 312 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 RHOUQ7L0Q8 258 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 SEMA6DQ8NFY4 1073 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 SPACA5Q96QH8 159 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 SLC25A32Q9H2D1 315 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 SMCO4Q9NRQ5 59 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 DLL3Q9NYJ7 618 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 SF3B6Q9Y3B4 125 aaKnown RBP9.43□□□□□ -0.9
TCOF1-204ENST00000427724 ETV7Q9Y603 341 aa9.43□□□□□ -0.9
TCOF1-204ENST00000427724 OR6C68A6NDL8 312 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 GUCA2AQ02747 115 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 TM4SF19Q96DZ7 209 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF681Q96N22 645 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 ADAT1Q9BUB4 502 aaKnown RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 ACKR4Q9NPB9 350 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 MRPS18AQ9NVS2 196 aaKnown RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 OR52A1Q9UKL2 312 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 KCNIP3Q9Y2W7 256 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 EPG5Q9HCE0 2579 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 SHISA3A0PJX4 238 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 CYC1P08574 325 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 CLINT1Q14677 625 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 PLA1AQ53H76 456 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 C5orf42Q9H799 3197 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 XIRP2A4UGR9 3374 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 TMEM200CA6NKL6 621 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 C4orf51C9J302 202 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 TSTD3H0UI37 97 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF205O95201 554 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 S100A8P05109 93 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 SULT1A3P0DMM9 295 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 SULT1A4P0DMN0 295 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms