RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 SPP1P10451 314 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 FFAR4Q5NUL3 377 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 OR2W3Q7Z3T1 314 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 ARRDC1Q8N5I2 433 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 MCHR2Q969V1 340 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 RPEQ96AT9 228 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 ADAM20O43506 726 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 PRICKLE4Q2TBC4 344 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 SLC16A12Q6ZSM3 486 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 TMPRSS11FQ6ZWK6 438 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 AMER3Q8N944 861 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 IL20Q9NYY1 176 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 LOC102723971A0A1B0GUV8 181 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 FAM3AP98173 230 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 NKG7Q16617 165 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 PRSS41Q7RTY9 318 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 TSPAN32Q96QS1 320 aa16.04■□□□□ 0.16
ARHGEF28-203ENST00000426542 SFTA3P0C7M3 94 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 PTHLHP12272 177 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 BCL2L2Q92843 193 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 PLSCR3Q9NRY6 295 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 PSG11Q9UQ72 335 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 TAF1P21675 1872 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 ASPDHA6ND91 283 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 BMI1P35226 326 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 HTRA4P83105 476 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 ERRFI1Q9UJM3 462 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 MASP2O00187 686 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 CTSVO60911 334 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 SCO1O75880 301 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 PPP1CBP62140 327 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 BTLAQ7Z6A9 289 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 FAAP24Q9BTP7 215 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 DHRS3O75911 302 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 MPLP40238 635 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 ZNF429Q86V71 674 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 BMP5P22003 454 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 LPAR6P43657 344 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 IGFBP7Q16270 282 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 DHRS7BQ6IAN0 325 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 ACSM6Q6P461 480 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 FA2HQ7L5A8 372 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 TMEM147Q9BVK8 224 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 UCK1Q9HA47 277 aa16.03■□□□□ 0.16
ARHGEF28-203ENST00000426542 HYAL3O43820 417 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF28-203ENST00000426542 AMTP48728 403 aa16.02■□□□□ 0.16
ARHGEF28-203ENST00000426542 CCL17Q92583 94 aa16.02■□□□□ 0.16
ARHGEF28-203ENST00000426542 PCED1AQ9H1Q7 454 aa16.02■□□□□ 0.16
ARHGEF28-203ENST00000426542 SIRT5Q9NXA8 310 aa16.02■□□□□ 0.16
ARHGEF28-203ENST00000426542 S100A8P05109 93 aa16.02■□□□□ 0.16
ARHGEF28-203ENST00000426542 CCL2P13500 99 aa16.02■□□□□ 0.16
ARHGEF28-203ENST00000426542 PEX11BO96011 259 aa16.02■□□□□ 0.16
ARHGEF28-203ENST00000426542 HIST1H1DP16402 221 aaKnown RBP16.02■□□□□ 0.16
ARHGEF28-203ENST00000426542 HFEQ30201 348 aa16.02■□□□□ 0.16
ARHGEF28-203ENST00000426542 PABPC1L2AQ5JQF8 200 aa16.02■□□□□ 0.16
ARHGEF28-203ENST00000426542 RFESDQ8TAC1 157 aa16.02■□□□□ 0.16
ARHGEF28-203ENST00000426542 CXorf51AA0A1B0GTR3 108 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 PRSS44E7EML9 344 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 HRASP01112 189 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 ZNF32P17041 273 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 TPPP2P59282 170 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 INSL4Q14641 139 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 COMMD1Q8N668 190 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 RPP25Q9BUL9 199 aaKnown RBP16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 UQCC1Q9NVA1 299 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 IGHV3-43A0A0B4J1X8 118 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 IGHV3-43DP0DP04 118 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 PTGFRP43088 359 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 OR3A4PP47883 348 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 SLC37A1P57057 533 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 YBX1P67809 324 aaKnown RBP16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 SPINK9Q5DT21 86 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 ACER2Q5QJU3 275 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 KIAA1958Q8N8K9 716 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 OR10D3Q8NH80 312 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 UQCC2Q9BRT2 126 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 CLEC5AQ9NY25 188 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 TRAPPC1Q9Y5R8 145 aa16.02■□□□□ 0.15
ARHGEF28-203ENST00000426542 SSPNQ14714 243 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 Q3ZCU0 254 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 MIDNQ504T8 468 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 ZNF561Q8N587 486 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 OR4F17Q8NGA8 305 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 CA5BP1Q8WTZ4 195 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 RNASEK-C17orf49H0YIS7 233 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 LYZL6O75951 148 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 SLC25A5P05141 298 aaKnown RBP16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 KCNJ3P48549 501 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 PAX5Q02548 391 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 VAMP3Q15836 100 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 ZDHHC22Q8N966 263 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 WDR61Q9GZS3 305 aaKnown RBP16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 RNF24Q9Y225 148 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 PRRX2Q99811 253 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 PPIL1Q9Y3C6 166 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 PJVKQ0ZLH3 352 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 TCTE3Q8IZS6 198 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 CYSLTR2Q9NS75 346 aa16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 TMEFF2Q9UIK5 374 aaPredicted RBP16.01■□□□□ 0.15
ARHGEF28-203ENST00000426542 CROCCQ5TZA2 2017 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms