RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 INO80EQ8NBZ0 244 aaPredicted RBP9.35□□□□□ -0.91
CUX1-205ENST00000425244 BVESQ8NE79 360 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 PXT1Q8NFP0 134 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 MYO7BQ6PIF6 2116 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 ARGFXA6NJG6 315 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 CDRT15L2A8MXV6 281 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 PROB1E7EW31 1015 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 NUPL2O15504 423 aaKnown RBP9.35□□□□□ -0.91
CUX1-205ENST00000425244 NKX2-8O15522 239 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 BCL2L11O43521 198 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 DBHP09172 617 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 TMEM50BP56557 158 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 FOXC1Q12948 553 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 HIST3H3Q16695 136 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 UNQ6126/PRO20091Q6UXV3 157 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 GTPBP8Q8N3Z3 284 aaPredicted RBP9.35□□□□□ -0.91
CUX1-205ENST00000425244 STPG2Q8N412 459 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 OR56B1Q8NGI3 324 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 OR5H2Q8NGV7 314 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 OR14K1Q8NGZ2 314 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 TERB2Q8NHR7 220 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 PIGTQ969N2 578 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 LYZL4Q96KX0 146 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 URM1Q9BTM9 101 aaKnown RBP9.35□□□□□ -0.91
CUX1-205ENST00000425244 OR10A2Q9H208 303 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 SLC6A15Q9H2J7 730 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 RNF222A6NCQ9 220 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 A8MXK9 166 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 OR2F2O95006 317 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 GSTP1P09211 210 aaKnown RBP9.35□□□□□ -0.91
CUX1-205ENST00000425244 MPZP25189 248 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 ADH6P28332 368 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 GSK3AP49840 483 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 PRSS12P56730 875 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 MLF1P58340 268 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 OR2F1Q13607 317 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 KISS1Q15726 138 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 SPINK14Q6IE38 97 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 ACOT7LQ6ZUV0 252 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 TMPRSS7Q7RTY8 843 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 HOGA1Q86XE5 327 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 S100A13Q99584 98 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 BCL2L14Q9BZR8 327 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 MED9Q9NWA0 146 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 PLA2G3Q9NZ20 509 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 FBLN5Q9UBX5 448 aa9.35□□□□□ -0.91
CUX1-205ENST00000425244 ACACAQ13085 2346 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 KRBOX1C9JBD0 128 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 TERTO14746 1132 aaKnown RBP9.34□□□□□ -0.91
CUX1-205ENST00000425244 TNFSF11O14788 317 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 SNAPINO95295 136 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 DUS4LO95620 317 aaKnown RBP9.34□□□□□ -0.91
CUX1-205ENST00000425244 APOC1P02654 83 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 SERPINA7P05543 415 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 FGF2P09038 288 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 SLC25A4P12235 298 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 FCGR2AP12318 317 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 TBPP20226 339 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 BLVRBP30043 206 aaPredicted RBP9.34□□□□□ -0.91
CUX1-205ENST00000425244 OR3A2P47893 321 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 RELQ04864 619 aaPredicted RBP9.34□□□□□ -0.91
CUX1-205ENST00000425244 DTX1Q86Y01 620 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 GJC3Q8NFK1 279 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 ROBO4Q8WZ75 1007 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 DCUN1D4Q92564 292 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 NARS2Q96I59 477 aaKnown RBP9.34□□□□□ -0.91
CUX1-205ENST00000425244 PLEK2Q9NYT0 353 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 PIGLQ9Y2B2 252 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 PLATP00750 562 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 APOC3P02656 99 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 RFC3P40938 356 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 PTGFRP43088 359 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 CSNK2A1P68400 391 aaPredicted RBP9.34□□□□□ -0.91
CUX1-205ENST00000425244 ENDOGQ14249 297 aaKnown RBP9.34□□□□□ -0.91
CUX1-205ENST00000425244 KCNMB1Q16558 191 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 NKAPLQ5M9Q1 402 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 GALNTL5Q7Z4T8 443 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 ZNF565Q8N9K5 539 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 NAXEQ8NCW5 288 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 CSNK2A3Q8NEV1 391 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 OR9K2Q8NGE7 335 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 PSMF1Q92530 271 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 ZNF837Q96EG3 531 aaPredicted RBP9.34□□□□□ -0.91
CUX1-205ENST00000425244 ULBP2Q9BZM5 246 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 SLC25A32Q9H2D1 315 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 NELFAQ9H3P2 528 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 C5orf66Q9H5L9 145 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 CHMP1AQ9HD42 196 aaPredicted RBP9.34□□□□□ -0.91
CUX1-205ENST00000425244 PCDHB16Q9NRJ7 776 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 CSAG2Q9Y5P2 127 aa9.34□□□□□ -0.91
CUX1-205ENST00000425244 MAP1BP46821 2468 aaKnown RBP9.33□□□□□ -0.92
CUX1-205ENST00000425244 A0A0G2JMM0 328 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 A0A1B0GW55 424 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 A0A1W2PPB8 328 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 A0A1W2PRS3 328 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 KIR3DP1A8MWS1 328 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 ADAP1O75689 374 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 DUX4L2P0CJ85 424 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 DUX4L3P0CJ86 424 aa9.33□□□□□ -0.92
CUX1-205ENST00000425244 DUX4L4P0CJ87 422 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms