RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 RABEP2Q9H5N1 569 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 OPA3Q9H6K4 179 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 NDE1Q9NXR1 346 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 DPM3Q9P2X0 92 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 DNAJB9Q9UBS3 223 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 OR14J1Q9UGF5 321 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 PYCARDQ9ULZ3 195 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 PRSS37A4D1T9 235 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 OR6C68A6NDL8 312 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 RFPL4AA6NLU0 287 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 NCBP2LA6PVI3 153 aaKnown RBP4.89□□□□□ -1.63
SDCBP-203ENST00000424270 RFPL4AL1F8VTS6 287 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 IGF1P05019 195 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 FAM153BP0C7A2 387 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 ZCCHC18P0CG32 403 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 TROVE2P10155 538 aaKnown RBP eCLIP4.89□□□□□ -1.63
SDCBP-203ENST00000424270 SLC2A1P11166 492 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 CALRP27797 417 aaKnown RBP4.89□□□□□ -1.63
SDCBP-203ENST00000424270 IL12AP29459 219 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 RBM34P42696 430 aaKnown RBP4.89□□□□□ -1.63
SDCBP-203ENST00000424270 SLURP1P55000 103 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 EDDM3AQ14507 147 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 KRT72Q14CN4 511 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 SMIM21Q3B7S5 101 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 LRIF1Q5T3J3 769 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 GDPD3Q7L5L3 318 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 OAFQ86UD1 273 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 PGAM4Q8N0Y7 254 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF596Q8TC21 504 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 DLX4Q92988 240 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-203ENST00000424270 BPIFA2Q96DR5 249 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 RNF170Q96K19 258 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 Q96M85 177 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 ZIM3Q96PE6 472 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 COPS4Q9BT78 406 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 TMEM133Q9H2Q1 129 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 WDR55Q9H6Y2 383 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-203ENST00000424270 PLEKHA3Q9HB20 300 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 STUB1Q9UNE7 303 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 ADAM18Q9Y3Q7 739 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 LHFPL6Q9Y693 200 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 SESN1Q9Y6P5 492 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 MUC4Q99102 2169 aa4.89□□□□□ -1.63
SDCBP-203ENST00000424270 FAM172BPA6NC97 362 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 ARRDC5A6NEK1 342 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 TMEM210A6NLX4 147 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 EFCAB9A8MZ26 197 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 SOCS2O14508 198 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 XRCC2O43543 280 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 AHCYL1O43865 530 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 LYPD3O95274 346 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 RBP4P02753 201 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 ANXA2P07355 339 aaKnown RBP4.88□□□□□ -1.63
SDCBP-203ENST00000424270 FASP25445 335 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 PRDX2P32119 198 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 GPR12P47775 334 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 OR1E2P47887 323 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 PRKXP51817 358 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 PSMA6P60900 246 aaKnown RBP4.88□□□□□ -1.63
SDCBP-203ENST00000424270 GNB1P62873 340 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 KRR1Q13601 381 aaKnown RBP4.88□□□□□ -1.63
SDCBP-203ENST00000424270 EIF2B1Q14232 305 aaKnown RBP4.88□□□□□ -1.63
SDCBP-203ENST00000424270 SNCBQ16143 134 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 KRT71Q3SY84 523 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 SLC36A3Q495N2 470 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 MESTQ5EB52 335 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF575Q86XF7 245 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 NKAIN4Q8IVV8 208 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 TIGD4Q8IY51 512 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 ABHD12Q8N2K0 398 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 LINC00471Q8N535 108 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 C5orf56Q8N8D9 126 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 OR4C15Q8NGM1 316 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF671Q8TAW3 534 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 RGP1Q92546 391 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-203ENST00000424270 CREB3L1Q96BA8 519 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 SDSLQ96GA7 329 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 NABP2Q9BQ15 211 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 CHCHD6Q9BRQ6 235 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF426Q9BUY5 554 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 PAIP1Q9H074 479 aaKnown RBP4.88□□□□□ -1.63
SDCBP-203ENST00000424270 NUAK2Q9H093 628 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 OR51J1Q9H342 316 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 SP140LQ9H930 580 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 GNB4Q9HAV0 340 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 SRA1Q9HD15 236 aaKnown RBP4.88□□□□□ -1.63
SDCBP-203ENST00000424270 AIG1Q9NVV5 245 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 ING3Q9NXR8 418 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 VSIG4Q9Y279 399 aa4.88□□□□□ -1.63
SDCBP-203ENST00000424270 A0A0J9YWU9 116 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 A0A1B0GVY2 172 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 hADV38S2A0JD32 116 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 SHISA3A0PJX4 238 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 MAGEA13PA6NCF6 341 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 FAM183AA6NL82 134 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF850A8MQ14 1090 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 EVPLLA8MZ36 301 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 LINC01619G3V211 115 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 H0Y980 276 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 SPAG7O75391 227 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms