RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 CD177Q8N6Q3 437 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 OR11H6Q8NGC7 330 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 GNPDA2Q8TDQ7 276 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 PIGCQ92535 297 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 MYDGFQ969H8 173 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 NMNAT2Q9BZQ4 307 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 U3KQK5 164 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 FAM90A22PA8MWA6 464 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 SLC22A2O15244 555 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 CLIC3O95833 236 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 ARG1P05089 322 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 BLVRAP53004 296 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 DLX6P56179 175 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 EIF2B1Q14232 305 aaKnown RBP13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 ZNF273Q14593 569 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 GFOD2Q3B7J2 385 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 ZNF626Q68DY1 528 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 RPL13AP3Q6NVV1 102 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 ZDHHC23Q8IYP9 409 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 LINC00482Q8N8I6 264 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 OR2T27Q8NH04 317 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 RP9Q8TA86 221 aaKnown RBP13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 DPF1Q92782 380 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 PGAM5Q96HS1 289 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 HIST1H2AAQ96QV6 131 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 ABHD6Q9BV23 337 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 EGLN3Q9H6Z9 239 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 IL20Q9NYY1 176 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 DNAJC27Q9NZQ0 273 aa13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 SAMD4AQ9UPU9 718 aaKnown RBP13.4□□□□□ -0.26
CHCHD3-202ENST00000423635 RFPL4AA6NLU0 287 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 RFPL4AL1F8VTS6 287 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 NDUFAB1O14561 156 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 AZGP1P25311 298 aaKnown RBP13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 OPRL1P41146 370 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 GPM6AP51674 278 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 GNG3P63215 75 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 LINC01590Q5TEZ4 76 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 GLYATQ6IB77 296 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 ZNF782Q6ZMW2 699 aaPredicted RBP13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 ACP7Q6ZNF0 438 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 RNF144BQ7Z419 303 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 OR4M1Q8NGD0 313 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 OR52L1Q8NGH7 329 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 OR13D1Q8NGV5 346 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 AQP3Q92482 292 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 KCTD14Q9BQ13 255 aaPredicted RBP13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 BRD7Q9NPI1 651 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 CDH10Q9Y6N8 788 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 H3BUI4 141 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 SEMG1P04279 462 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 GYPBP06028 91 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 SPI1P17947 270 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 PRDX2P32119 198 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 ZNF770Q6IQ21 691 aaPredicted RBP13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 LCN8Q6JVE9 175 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 LYZL4Q96KX0 146 aa13.39□□□□□ -0.27
CHCHD3-202ENST00000423635 ZNF732B4DXR9 585 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 SLC1A7O00341 560 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 RBP4P02753 201 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 CLUP10909 449 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 OR12D2P58182 307 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 CRMP1Q14194 572 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 CEACAM21Q3KPI0 293 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 C16orf82Q7Z2V1 217 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 MRPL41Q8IXM3 137 aaKnown RBP13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 OR4X2Q8NGF9 303 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 OR5A2Q8NGI9 324 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 AMELYQ99218 206 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 C1orf21Q9H246 121 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 ABCD2Q9UBJ2 740 aa13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 ZMAT5Q9UDW3 170 aaKnown RBP13.38□□□□□ -0.27
CHCHD3-202ENST00000423635 DNAH7Q8WXX0 4024 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 ZFPL1O95159 310 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 TK1P04183 234 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 MINOS1Q5TGZ0 78 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 HACD2Q6Y1H2 254 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 POC1AQ8NBT0 407 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 OR8D4Q8NGM9 314 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 OR6K6Q8NGW6 343 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 ITFG2Q969R8 447 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 PYURFQ96I23 114 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 MCRIP2Q9BUT9 160 aaKnown RBP13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 CHID1Q9BWS9 393 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 MINOS1-NBL1R4GNA1 71 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 TENM2Q9NT68 2774 aa13.37□□□□□ -0.27
CHCHD3-202ENST00000423635 OR5B21A6NL26 309 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 HMGB1P1B2RPK0 211 aaPredicted RBP13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 NOS1APO75052 506 aaPredicted RBP13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 H2BFMP0C1H6 154 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 ZNF728P0DKX0 622 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 COX4I1P13073 169 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 JUNBP17275 347 aaPredicted RBP13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 RRM2P31350 389 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 SMIM21Q3B7S5 101 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 KLHL22Q53GT1 634 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 HAGHLQ6PII5 290 aaPredicted RBP13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 SHFQ7M4L6 423 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 PIGWQ7Z7B1 504 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms