RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 ONECUT1Q9UBC0 465 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 EXOGQ9Y2C4 368 aaKnown RBP8.56□□□□□ -1.04
CMSS1-201ENST00000421999 ANKRD34BA5PLL1 514 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 TNFSF12O43508 249 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 TSPAN9O75954 239 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 OR8U9P0C7N5 309 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 RPS2P15880 293 aaKnown RBP8.56□□□□□ -1.04
CMSS1-201ENST00000421999 CCL8P80075 99 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 ZNF92Q03936 586 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 RTP5Q14D33 572 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 ST3GAL2Q16842 350 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 GPR157Q5UAW9 335 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 OR6K3Q8NGY3 331 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 ARL11Q969Q4 196 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 S100PBPQ96BU1 408 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 MS4A3Q96HJ5 214 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 OR2B2Q9GZK3 357 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 MYOZ1Q9NP98 299 aaPredicted RBP8.56□□□□□ -1.04
CMSS1-201ENST00000421999 ISYNA1Q9NPH2 558 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 A0A1W2PRD5 423 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 A0A1W2PRF3 423 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 A0A1W2PRM7 423 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 TFP02787 698 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 DEFA4P12838 97 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 SSX9Q7RTT3 188 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 C20orf196Q8IYI0 205 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 PRSS35Q8N3Z0 413 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 OR4A16Q8NH70 328 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 C7orf50Q9BRJ6 194 aaKnown RBP8.56□□□□□ -1.04
CMSS1-201ENST00000421999 OR2H1Q9GZK4 316 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 ZNF552Q9H707 407 aaPredicted RBP8.56□□□□□ -1.04
CMSS1-201ENST00000421999 RYDENQ9NUL5 291 aaKnown RBP8.56□□□□□ -1.04
CMSS1-201ENST00000421999 RNF150Q9ULK6 438 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 A3GALT2U3KPV4 340 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 CST2P09228 141 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 PSMB1P20618 241 aaKnown RBP8.56□□□□□ -1.04
CMSS1-201ENST00000421999 TGM1P22735 817 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 GPR12P47775 334 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 NKX6-1P78426 367 aaPredicted RBP8.56□□□□□ -1.04
CMSS1-201ENST00000421999 FGL1Q08830 312 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 HNF4GQ14541 408 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 RBMS2Q15434 407 aaKnown RBP8.56□□□□□ -1.04
CMSS1-201ENST00000421999 SDSLQ96GA7 329 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 OR2J1Q9GZK6 312 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 NUBP2Q9Y5Y2 271 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 PTTG1O95997 202 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 IFNA10P01566 189 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 GNB3P16520 340 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 PCMT1P22061 227 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 AGTR1P30556 359 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 RPL23AP62750 156 aaKnown RBP8.55□□□□□ -1.04
CMSS1-201ENST00000421999 ZNF85Q03923 595 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 SSX1Q16384 188 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 ADPRHL1Q8NDY3 354 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 OR8B12Q8NGG6 310 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 STOML3Q8TAV4 291 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 PLEKHA3Q9HB20 300 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 HEYLQ9NQ87 328 aaPredicted RBP8.55□□□□□ -1.04
CMSS1-201ENST00000421999 RDH8Q9NYR8 311 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 TRIM64CA6NLI5 447 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 MS4A18H0YCH9 400 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 CDIPTO14735 213 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 TMPRSS2O15393 492 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 NBL1P41271 181 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 ZNF616Q08AN1 781 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 MS4A18Q3C1V0 323 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 C6orf183Q5T699 404 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 FAM58AQ8N1B3 248 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 DCUN1D4Q92564 292 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 CHST6Q9GZX3 395 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 PLEKHF2Q9H8W4 249 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 SONP18583 2426 aaKnown RBP8.55□□□□□ -1.04
CMSS1-201ENST00000421999 ARPC5O15511 151 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 IFNA7P01567 189 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 CTXN2P0C2S0 81 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 ACSM4P0C7M7 580 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 CTF1Q16619 201 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 RNLSQ5VYX0 342 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 MOGAT3Q86VF5 341 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 ARHGEF39Q8N4T4 335 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 KCNMB2Q9Y691 235 aa8.55□□□□□ -1.04
CMSS1-201ENST00000421999 RAMP1O60894 148 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 COX7A1P24310 79 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 HACD4Q5VWC8 232 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 Q8IYB0 196 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 SLC25A46Q96AG3 418 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 NPAS1Q99742 590 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 KLHDC3Q9BQ90 382 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 TREM1Q9NP99 234 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 CISD1Q9NZ45 108 aaKnown RBP8.54□□□□□ -1.04
CMSS1-201ENST00000421999 GHRLQ9UBU3 117 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 MRM2Q9UI43 246 aaKnown RBP8.54□□□□□ -1.04
CMSS1-201ENST00000421999 ZIC3O60481 467 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 PRAF2O60831 178 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 CLPSP04118 112 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 FUT3P21217 361 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 TAS2R20P59543 309 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 PLA1AQ53H76 456 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 SLC25A30Q5SVS4 291 aa8.54□□□□□ -1.04
CMSS1-201ENST00000421999 SIAH3Q8IW03 269 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms