RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 CD300LDQ6UXZ3 194 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 THAP5Q7Z6K1 395 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 NDUFA11Q86Y39 141 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 Q8N2B8 174 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 C11orf42Q8N5U0 333 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 OR5A2Q8NGI9 324 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 FAM81AQ8TBF8 368 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 SGCDQ92629 289 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 ITFG2Q969R8 447 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 OR51V1Q9H2C8 321 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 NIPAL2Q9H841 368 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 ZNF702PQ9H963 129 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 SERTAD4Q9NUC0 356 aa13.66□□□□□ -0.22
UPF3AP3-201ENST00000420996 NOTCH3Q9UM47 2321 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 hCG_1809904A0A1W2PP81 198 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 A0A1W2PPE2 198 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 A0A1W2PR64 198 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 A0A1W2PRV1 198 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 VGLL3A8MV65 326 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 MTRF1O75570 445 aaKnown RBP13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 CD28P10747 220 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 PAICSP22234 425 aaKnown RBP13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 CEP78Q5JTW2 689 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 TMEM200BQ69YZ2 307 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 CYP2R1Q6VVX0 501 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 CD177Q8N6Q3 437 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 OR4F17Q8NGA8 305 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 TEX47Q8TBZ9 253 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 AQP3Q92482 292 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 R3HDM4Q96D70 268 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 OR4F4Q96R69 305 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 CDCA4Q9BXL8 241 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 MMP28Q9H239 520 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 VNN3Q9NY84 501 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 ACTR3BQ9P1U1 418 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 SAMHD1Q9Y3Z3 626 aaKnown RBP13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 U3KQV3 271 aa13.65□□□□□ -0.22
UPF3AP3-201ENST00000420996 A0A0U1RQV5 110 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 FAM90A8PA6NJQ4 464 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 OR5B21A6NL26 309 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 RFPL4AA6NLU0 287 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 RFPL4AL1F8VTS6 287 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 SELENOFO60613 162 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 COX7A1P24310 79 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 HABP2Q14520 560 aaPredicted RBP13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 HSP90B2PQ58FF3 399 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 OR2T5Q6IEZ7 315 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 ACP7Q6ZNF0 438 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 DEFB107AQ8IZN7 70 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 ZNF561Q8N587 486 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 IQCF1Q8N6M8 205 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 OR2T29Q8NH02 315 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 NIPSNAP1Q9BPW8 284 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 MAGIXQ9H6Y5 334 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 REEP1Q9H902 201 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 AURKAIP1Q9NWT8 199 aaPredicted RBP13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 USE1Q9NZ43 259 aa13.64□□□□□ -0.23
UPF3AP3-201ENST00000420996 ACOD1A6NK06 481 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 ADARB2-AS1A8MUL3 147 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 PRR23D1E9PI22 279 aaPredicted RBP13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 SLC1A7O00341 560 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 PRR23D2P0DMB1 279 aaPredicted RBP13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 ATP6V1B1P15313 513 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 ATP6V1B2P21281 511 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 PRDX2P32119 198 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 ERVFRD-1P60508 538 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 SMIM21Q3B7S5 101 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 HAGHLQ6PII5 290 aaPredicted RBP13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 C16orf89Q6UX73 402 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 LHFPL4Q7Z7J7 247 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 CALHM1Q8IU99 346 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 POC1AQ8NBT0 407 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 OR2T27Q8NH04 317 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 WIPF2Q8TF74 440 aaPredicted RBP13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 PHF21AQ96BD5 680 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 CITED2Q99967 270 aaPredicted RBP13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 NDE1Q9NXR1 346 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 TAGLN3Q9UI15 199 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 TCF19Q9Y242 345 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 KLHDC2Q9Y2U9 406 aa13.63□□□□□ -0.23
UPF3AP3-201ENST00000420996 TCRBV5S2A0A599 114 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 H3BN98 237 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 SNX3O60493 162 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 CCL3L1P16619 93 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 CNN3Q15417 329 aaKnown RBP13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 DMRTC1Q5HYR2 192 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 PLBD1Q6P4A8 553 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 CCBE1Q6UXH8 406 aaPredicted RBP13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 MOB3CQ70IA8 216 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 TRPM8Q7Z2W7 1104 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 KRT77Q7Z794 578 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 DYNAPQ8N1N2 210 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 OR10G2Q8NGC3 310 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 OR4M1Q8NGD0 313 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 PRSS22Q9GZN4 317 aa13.62□□□□□ -0.23
UPF3AP3-201ENST00000420996 A6NDX4 124 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 GSC2O15499 205 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 PRODHO43272 600 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 FAHP16930 419 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 ALOX5APP20292 161 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms