RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 PCGF3Q3KNV8 242 aa10.58□□□□□ -0.72
TMEM53-206ENST00000420706 FAM209AQ5JX71 171 aa10.58□□□□□ -0.72
TMEM53-206ENST00000420706 C1orf100Q5SVJ3 147 aa10.58□□□□□ -0.72
TMEM53-206ENST00000420706 PRAMEF6Q5VXH4 476 aa10.58□□□□□ -0.72
TMEM53-206ENST00000420706 ANGPTL5Q86XS5 388 aa10.58□□□□□ -0.72
TMEM53-206ENST00000420706 ZNF573Q86YE8 665 aa10.58□□□□□ -0.72
TMEM53-206ENST00000420706 CALHM1Q8IU99 346 aa10.58□□□□□ -0.72
TMEM53-206ENST00000420706 JAGN1Q8N5M9 183 aa10.58□□□□□ -0.72
TMEM53-206ENST00000420706 RFT1Q96AA3 541 aa10.58□□□□□ -0.72
TMEM53-206ENST00000420706 OR2V2Q96R30 315 aa10.58□□□□□ -0.72
TMEM53-206ENST00000420706 GPER1Q99527 375 aa10.58□□□□□ -0.72
TMEM53-206ENST00000420706 NKX3-1Q99801 234 aaPredicted RBP10.58□□□□□ -0.72
TMEM53-206ENST00000420706 LIME1Q9H400 295 aa10.58□□□□□ -0.72
TMEM53-206ENST00000420706 METTL17Q9H7H0 456 aaPredicted RBP10.58□□□□□ -0.72
TMEM53-206ENST00000420706 IGHV3-64DA0A0J9YX35 117 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 LRP5LA4QPB2 252 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 NOTOA8MTQ0 251 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 CDKN1AP38936 164 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 PMELP40967 661 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 GATA4P43694 442 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 ZP1P60852 638 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 CCL8P80075 99 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 ZNF154Q13106 437 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 MPPED2Q15777 294 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 FAM166AQ6J272 317 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 SCCPDHQ8NBX0 429 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 UQCC2Q9BRT2 126 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 EGLN1Q9GZT9 426 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 RAB1BQ9H0U4 201 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 TLNRD1Q9H1K6 362 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 CNTD2Q9H8S5 307 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 DECR2Q9NUI1 292 aa10.57□□□□□ -0.72
TMEM53-206ENST00000420706 CHD3Q12873 2000 aaKnown RBP10.57□□□□□ -0.72
TMEM53-206ENST00000420706 ADGRG4Q8IZF6 3080 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 IFITM5A6NNB3 132 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 H7C417 338 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 SLC17A2O00624 439 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 CDIPTO14735 213 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 TPD52L2O43399 206 aaKnown RBP10.56□□□□□ -0.72
TMEM53-206ENST00000420706 SPRY1O43609 319 aaPredicted RBP10.56□□□□□ -0.72
TMEM53-206ENST00000420706 SYNGR1O43759 233 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 HPXP02790 462 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 SLC2A2P11168 524 aaPredicted RBP10.56□□□□□ -0.72
TMEM53-206ENST00000420706 TNFRSF1AP19438 455 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 MPZP25189 248 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 HTR2CP28335 458 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 PTGFRP43088 359 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 OR3A4PP47883 348 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 POU3F4P49335 361 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 PDZK1IP1Q13113 114 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 RIN1Q13671 783 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 TESK1Q15569 626 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 HES5Q5TA89 166 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 SFXN4Q6P4A7 337 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 HAGHLQ6PII5 290 aaPredicted RBP10.56□□□□□ -0.72
TMEM53-206ENST00000420706 ASCL4Q6XD76 172 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 ZNF826PQ6ZT77 177 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 C1QL2Q7Z5L3 287 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 OR4D6Q8NGJ1 314 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 OR5D18Q8NGL1 313 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 DYNC2LI1Q8TCX1 351 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 NEU4Q8WWR8 484 aaPredicted RBP10.56□□□□□ -0.72
TMEM53-206ENST00000420706 AQP3Q92482 292 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 NRGNQ92686 78 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 ERGIC1Q969X5 290 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 SLC25A28Q96A46 364 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 SLC25A46Q96AG3 418 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 CPNE2Q96FN4 548 aaPredicted RBP10.56□□□□□ -0.72
TMEM53-206ENST00000420706 SORCS2Q96PQ0 1159 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 CCL19Q99731 98 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 BARHL1Q9BZE3 327 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 PKIBQ9C010 78 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 PLGRKTQ9HBL7 147 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 UFSP2Q9NUQ7 469 aa10.56□□□□□ -0.72
TMEM53-206ENST00000420706 AIPO00170 330 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 RHBDL1O75783 438 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 PLATP00750 562 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 TMEM225BP0DP42 221 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 CFPP27918 469 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 RORCP51449 518 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 IL24Q13007 206 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 HNRNPA0Q13151 305 aaKnown RBP10.55□□□□□ -0.72
TMEM53-206ENST00000420706 IDNKQ5T6J7 187 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 GLIPR1L1Q6UWM5 242 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 SLC25A26Q70HW3 274 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 MOGAT3Q86VF5 341 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 CROCCP3Q8IVE0 287 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 MKXQ8IYA7 352 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 PNLDC1Q8NA58 520 aaKnown RBP10.55□□□□□ -0.72
TMEM53-206ENST00000420706 ZSCAN4Q8NAM6 433 aaPredicted RBP10.55□□□□□ -0.72
TMEM53-206ENST00000420706 PXT1Q8NFP0 134 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 OR6M1Q8NGM8 313 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 OR51F2Q8NH61 342 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 ZNF671Q8TAW3 534 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 TNFAIP8L1Q8WVP5 186 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 FN3KRPQ9HA64 309 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 SAP30LQ9HAJ7 183 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 GCM1Q9NP62 436 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 C1orf123Q9NWV4 160 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 STEAP1Q9UHE8 339 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms