RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 FAM57BQ71RH2 274 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 SLC16A9Q7RTY1 509 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 BCDIN3DQ7Z5W3 292 aaKnown RBP5.79□□□□□ -1.48
HMGN1-205ENST00000419378 LRRC28Q86X40 367 aaPredicted RBP5.79□□□□□ -1.48
HMGN1-205ENST00000419378 TCEANCQ8N8B7 351 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 OR52H1Q8NGJ2 320 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 TMEM163Q8TC26 289 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 SGK3Q96BR1 496 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 REEP6Q96HR9 211 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 TEAD3Q99594 435 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 PKP2Q99959 881 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 OSBPL10Q9BXB5 764 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 GABARAPL3Q9BY60 117 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 SLC22A4Q9H015 551 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 RIBC2Q9H4K1 309 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 OPA3Q9H6K4 179 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 SP140LQ9H930 580 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 G6PC2Q9NQR9 355 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 ZNF319Q9P2F9 582 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 NKX1-2Q9UD57 310 aaPredicted RBP5.79□□□□□ -1.48
HMGN1-205ENST00000419378 LAMP5Q9UJQ1 280 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 NOP16Q9Y3C1 178 aaKnown RBP5.79□□□□□ -1.48
HMGN1-205ENST00000419378 LRP12Q9Y561 859 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 STAB1Q9NY15 2570 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 WNK2Q9Y3S1 2297 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 A0A0G2JMP0 313 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 A0A0X1KG70 313 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 ANKRD30BLA7E2S9 258 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 CEACAM18A8MTB9 384 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 PRR32B1ATL7 298 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 F5H0A9 414 aaPredicted RBP5.78□□□□□ -1.48
HMGN1-205ENST00000419378 SPRY2O43597 315 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 GMDSO60547 372 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 ACTL6BO94805 426 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 PTBP3O95758 552 aaKnown RBP5.78□□□□□ -1.48
HMGN1-205ENST00000419378 PNPP00491 289 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 ANPEPP15144 967 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 CFL1P23528 166 aaKnown RBP5.78□□□□□ -1.48
HMGN1-205ENST00000419378 POLR2IP36954 125 aaKnown RBP5.78□□□□□ -1.48
HMGN1-205ENST00000419378 SRP14P37108 136 aaKnown RBP5.78□□□□□ -1.48
HMGN1-205ENST00000419378 DDOSTP39656 456 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 HCCSP53701 268 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 SEC61A1P61619 476 aaKnown RBP5.78□□□□□ -1.48
HMGN1-205ENST00000419378 FAM3AP98173 230 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 FOXI1Q12951 378 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 ZFP1Q6P2D0 407 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 MEPCEQ7L2J0 689 aaKnown RBP5.78□□□□□ -1.48
HMGN1-205ENST00000419378 KRT77Q7Z794 578 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.78□□□□□ -1.48
HMGN1-205ENST00000419378 C1orf87Q8N0U7 546 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 MUC20Q8N307 709 aaPredicted RBP5.78□□□□□ -1.48
HMGN1-205ENST00000419378 RFLNBQ8N5W9 214 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 BEND2Q8NDZ0 799 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 OR4M2Q8NGB6 313 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 OR8B12Q8NGG6 310 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 OR11L1Q8NGX0 322 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 ERGIC1Q969X5 290 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 PGAM5Q96HS1 289 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 OR8B4Q96RC9 309 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 IL4I1Q96RQ9 567 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 PRR25Q96S07 402 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 CNN2Q99439 309 aaKnown RBP5.78□□□□□ -1.48
HMGN1-205ENST00000419378 RBM4BQ9BQ04 359 aaKnown RBP5.78□□□□□ -1.48
HMGN1-205ENST00000419378 YIPF3Q9GZM5 350 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 RGCCQ9H4X1 137 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 NIPAL2Q9H841 368 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 PATZ1Q9HBE1 687 aaKnown RBP5.78□□□□□ -1.48
HMGN1-205ENST00000419378 ADGRL4Q9HBW9 690 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 TRIM36Q9NQ86 728 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 COPS3Q9UNS2 423 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 ANK2Q01484 3957 aa5.78□□□□□ -1.48
HMGN1-205ENST00000419378 PPIAL4EA0A075B759 164 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 A8MXK9 166 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 PPIAL4DF5H284 164 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 J3QLI3 93 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 AP4M1O00189 453 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 EI24O14681 340 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 PHF1O43189 567 aaPredicted RBP5.77□□□□□ -1.49
HMGN1-205ENST00000419378 FOXH1O75593 365 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 FSTL3O95633 263 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 ALPLP05186 524 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 PPIAL4FP0DN26 164 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 TMEM225BP0DP42 221 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 IRF2P14316 349 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 RPS2P15880 293 aaKnown RBP5.77□□□□□ -1.49
HMGN1-205ENST00000419378 LCN2P80188 198 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 HOXA4Q00056 320 aaPredicted RBP5.77□□□□□ -1.49
HMGN1-205ENST00000419378 OR8B8Q15620 311 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 MPPED2Q15777 294 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF404Q494X3 552 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 PLAC9Q5JTB6 97 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 FAM201AQ5SY85 155 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 DCAF12L2Q5VW00 463 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 FAHD2BQ6P2I3 314 aaPredicted RBP5.77□□□□□ -1.49
HMGN1-205ENST00000419378 KCTD18Q6PI47 426 aaPredicted RBP5.77□□□□□ -1.49
HMGN1-205ENST00000419378 DEGS2Q6QHC5 323 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 Q6ZWC4 215 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 WDR86Q86TI4 376 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 KLBQ86Z14 1044 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 GID4Q8IVV7 300 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms