RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ACOD1A6NK06 481 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 OR5B21A6NL26 309 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 ANGPTL7O43827 346 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 E2F6O75461 281 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 CALB2P22676 271 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 CAPZA1P52907 286 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 KCTD18Q6PI47 426 aaPredicted RBP11.78□□□□□ -0.52
PAF1-202ENST00000416728 HAGHLQ6PII5 290 aaPredicted RBP11.78□□□□□ -0.52
PAF1-202ENST00000416728 Q6ZTK2 550 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 KRT74Q7RTS7 529 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 THAP5Q7Z6K1 395 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 TMEM179BQ7Z7N9 219 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 ADGRG5Q8IZF4 528 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 BBS1Q8NFJ9 593 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 OR5A2Q8NGI9 324 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 ITFG2Q969R8 447 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 SSX3Q99909 188 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 YY1AP1Q9H869 796 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 FAM206AQ9NX38 181 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 TGP01266 2768 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 PSMD9O00233 223 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 ATP6V1B1P15313 513 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 SLC2A5P22732 501 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 HCCSP53701 268 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 CDK5Q00535 292 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 RIPPLY1Q0D2K3 151 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 APOFQ13790 326 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 DMRTC1Q5HYR2 192 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 PLCXD3Q63HM9 321 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 HCP5Q6MZN7 132 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 DEGS2Q6QHC5 323 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 MOB3CQ70IA8 216 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 TRPM8Q7Z2W7 1104 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 OR4C13Q8NGP0 309 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 C17orf50Q8WW18 174 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 AQP3Q92482 292 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 SDSLQ96GA7 329 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 MROQ9BYG7 248 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 YIPF3Q9GZM5 350 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 PBOV1Q9GZY1 135 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 C19orf12Q9NSK7 152 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 RASL12Q9NYN1 266 aa11.77□□□□□ -0.53
PAF1-202ENST00000416728 A0A1W2PPH5 198 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 GSC2O15499 205 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 HOXB6P17509 224 aaKnown RBP11.76□□□□□ -0.53
PAF1-202ENST00000416728 HERPUD1Q15011 391 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 LY6EQ16553 131 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 LRRC75BQ2VPJ9 315 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 SMIM21Q3B7S5 101 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 ZBTB37Q5TC79 503 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 C11orf88Q6PI97 169 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 HS3ST5Q8IZT8 346 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 OR51E1Q8TCB6 317 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 CANT1Q8WVQ1 401 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 RORBQ92753 470 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 CLPTM1LQ96KA5 538 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 HEXA-AS1Q9H8Q6 139 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 RAB18Q9NP72 206 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 GPR84Q9NQS5 396 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 ENPP5Q9UJA9 477 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 SIGLEC9Q9Y336 463 aa11.76□□□□□ -0.53
PAF1-202ENST00000416728 RFPL4AA6NLU0 287 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 AQP12BA6NM10 295 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 RFPL4AL1F8VTS6 287 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 SLC1A7O00341 560 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 ZNF254O75437 659 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 MTRF1O75570 445 aaKnown RBP11.75□□□□□ -0.53
PAF1-202ENST00000416728 MRPL3P09001 348 aaKnown RBP11.75□□□□□ -0.53
PAF1-202ENST00000416728 ANXA8P13928 327 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 FAHP16930 419 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 PRKACGP22612 351 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 KIR2DS4P43632 304 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 RPL31P62899 125 aaKnown RBP11.75□□□□□ -0.53
PAF1-202ENST00000416728 SNAPC1Q16533 368 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 AANATQ16613 207 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 ZNF829Q3KNS6 432 aaPredicted RBP11.75□□□□□ -0.53
PAF1-202ENST00000416728 ZNF684Q5T5D7 378 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 LCN1P1Q5VSP4 162 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 TMEM236Q5W0B7 351 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 ACP7Q6ZNF0 438 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 AQP12AQ8IXF9 295 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 MKXQ8IYA7 352 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 POC1AQ8NBT0 407 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 OR5K1Q8NHB7 308 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 OR2T6Q8NHC8 308 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 PPP1R35Q8TAP8 253 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 TEAD3Q99594 435 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 MEGF9Q9H1U4 602 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 SLC25A19Q9HC21 320 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 TVP23BQ9NYZ1 205 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 PIGLQ9Y2B2 252 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 TMEM14AQ9Y6G1 99 aa11.75□□□□□ -0.53
PAF1-202ENST00000416728 hCG_1809904A0A1W2PP81 198 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 A0A1W2PPE2 198 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 A0A1W2PR64 198 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 A0A1W2PRV1 198 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 DHRS3O75911 302 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 NRASP01111 189 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 IGLV3-1P01715 115 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 T-ENOLP0DO92 83 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms