RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 SLC39A7Q92504 469 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 EXTL1Q92935 676 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 CDX4O14627 284 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-203ENST00000416123 CD160O95971 181 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 HOXC8P31273 242 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 GPNMBQ14956 572 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 CLEC12BQ2HXU8 276 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 TMEM41BQ5BJD5 291 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 TMEM108Q6UXF1 575 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 BHLHA15Q7RTS1 189 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-203ENST00000416123 LYG1Q8N1E2 194 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 NTN4Q9HB63 628 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 SIRT3Q9NTG7 399 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-203ENST00000416123 TNS1Q9HBL0 1735 aaKnown RBP9.48□□□□□ -0.89
COL12A1-203ENST00000416123 EPPINO95925 133 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 RRASP10301 218 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 PDZD11Q5EBL8 140 aa9.48□□□□□ -0.89
COL12A1-203ENST00000416123 RCL1Q9Y2P8 373 aaKnown RBP9.48□□□□□ -0.89
COL12A1-203ENST00000416123 CLEC18AA5D8T8 446 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 M0R1X1 148 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 COX7A2P2O60397 106 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 RAB35Q15286 201 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 CLEC18CQ8NCF0 446 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 MARC2Q969Z3 335 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 MOB3AQ96BX8 217 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 RASL10BQ96S79 203 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 TMEM30CPA0ZSE6 113 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 ONECUT2O95948 504 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 FUCA1P04066 466 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 PRR35P0CG20 571 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 MESP2Q0VG99 397 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 BTNL3Q6UXE8 466 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 APOBEC4Q8WW27 367 aaKnown RBP9.47□□□□□ -0.89
COL12A1-203ENST00000416123 KCNIP2Q9NS61 270 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 OPN1MWP04001 364 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 OPN1MW2P0DN77 364 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 OPN1MW3P0DN78 364 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 TNFRSF1AP19438 455 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 OR5I1Q13606 314 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 MPPED2Q15777 294 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 SLC36A1Q7Z2H8 476 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 MRGPREQ86SM8 312 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 ZNF835Q9Y2P0 537 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 ATXN7O15265 892 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-203ENST00000416123 TMPRSS2O15393 492 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 ZNF354AO60765 605 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-203ENST00000416123 KLF3P57682 345 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-203ENST00000416123 SNTB1Q13884 538 aaKnown RBP9.47□□□□□ -0.89
COL12A1-203ENST00000416123 RHBDD2Q6NTF9 364 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 ABI3BPQ7Z7G0 1075 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 SLC38A6Q8IZM9 456 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 OR8B4Q96RC9 309 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 CLCF1Q9UBD9 225 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 CXorf51AA0A1B0GTR3 108 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 ZBTB25P24278 435 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 BAK1Q16611 211 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 LILRB4Q8NHJ6 448 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 M1APQ8TC57 530 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 GPX8Q8TED1 209 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 SLC25A32Q9H2D1 315 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 LINC01387J3KSC0 135 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 PMP22Q01453 160 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 C6orf201Q7Z4U5 140 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 CADM3Q8N126 398 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 DUS3LQ96G46 650 aaKnown RBP9.47□□□□□ -0.89
COL12A1-203ENST00000416123 ADGRL4Q9HBW9 690 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 IL20Q9NYY1 176 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 SPNP16150 400 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 Q56UQ5 140 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 TUSC5Q8IXB3 177 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 DYNC2LI1Q8TCX1 351 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 ABHD3Q8WU67 409 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 ZNF251Q9BRH9 671 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 CLEC5AQ9NY25 188 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 FOXJ3Q9UPW0 622 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 RALGAPA2Q2PPJ7 1873 aa9.47□□□□□ -0.89
COL12A1-203ENST00000416123 HPP00738 406 aa9.46□□□□□ -0.89
COL12A1-203ENST00000416123 RPL12P30050 165 aaKnown RBP9.46□□□□□ -0.89
COL12A1-203ENST00000416123 DBPQ10586 325 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-203ENST00000416123 HMGN3Q15651 99 aa9.46□□□□□ -0.89
COL12A1-203ENST00000416123 UBE3DQ7Z6J8 389 aa9.46□□□□□ -0.89
COL12A1-203ENST00000416123 TMED6Q8WW62 240 aa9.46□□□□□ -0.89
COL12A1-203ENST00000416123 RPUSD4Q96CM3 377 aaKnown RBP9.46□□□□□ -0.89
COL12A1-203ENST00000416123 GPR87Q9BY21 358 aa9.46□□□□□ -0.89
COL12A1-203ENST00000416123 AKR7A2O43488 359 aa9.46□□□□□ -0.89
COL12A1-203ENST00000416123 OR2C1O95371 312 aa9.46□□□□□ -0.89
COL12A1-203ENST00000416123 NGFP01138 241 aa9.46□□□□□ -0.89
COL12A1-203ENST00000416123 PSMB6P28072 239 aa9.46□□□□□ -0.89
COL12A1-203ENST00000416123 THSD4Q6ZMP0 1018 aa9.46□□□□□ -0.89
COL12A1-203ENST00000416123 ZNF785A8K8V0 405 aa9.46□□□□□ -0.89
COL12A1-203ENST00000416123 GABRB1P18505 474 aa9.46□□□□□ -0.89
COL12A1-203ENST00000416123 HSPB2A8KAH6 182 aa9.46□□□□□ -0.9
COL12A1-203ENST00000416123 TXNDC12O95881 172 aa9.46□□□□□ -0.9
COL12A1-203ENST00000416123 HSPB2Q16082 182 aa9.46□□□□□ -0.9
COL12A1-203ENST00000416123 RPUSD3Q6P087 351 aaKnown RBP9.46□□□□□ -0.9
COL12A1-203ENST00000416123 MYOZ1Q9NP98 299 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-203ENST00000416123 TIMM9Q9Y5J7 89 aa9.46□□□□□ -0.9
COL12A1-203ENST00000416123 ZNHIT1O43257 154 aa9.46□□□□□ -0.9
COL12A1-203ENST00000416123 CCL3P10147 92 aa9.46□□□□□ -0.9
COL12A1-203ENST00000416123 ACOT6Q3I5F7 207 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms