RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 C5orf49A4QMS7 147 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 MASP2O00187 686 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 SPINK4O60575 86 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 OR5G3P0C626 314 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 CYB561P49447 251 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 EGR3Q06889 387 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 MZT1Q08AG7 82 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 HES1Q14469 280 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 GUK1Q16774 197 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 TMEM128Q5BJH2 165 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 COMMD1Q8N668 190 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 FGF14Q92915 247 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 PINX1Q96BK5 328 aaKnown RBP11.54□□□□□ -0.56
SCN1B-202ENST00000415950 GDF2Q9UK05 429 aaPredicted RBP11.54□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF638Q14966 1978 aaKnown RBP11.54□□□□□ -0.56
SCN1B-202ENST00000415950 ONECUT2O95948 504 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 FAM157BP0CG42 384 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 B4GALT1P15291 398 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 GSK3AP49840 483 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 NCR3LG1Q68D85 454 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 NPEPL1Q8NDH3 523 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 AKR7LQ8NHP1 331 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 SLC39A7Q92504 469 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 GINS3Q9BRX5 216 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 OR51I2Q9H344 312 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 GPR179Q6PRD1 2367 aa11.54□□□□□ -0.56
SCN1B-202ENST00000415950 CREBBPQ92793 2442 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 TMEM218A2RU14 115 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CER1O95813 267 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CELA2BP08218 269 aaPredicted RBP11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CT45A6P0DMU7 189 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CT45A5P0DMU8 189 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CT45A7P0DMV0 189 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CT45A8P0DMV1 189 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CT45A9P0DMV2 189 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 DEFA4P12838 97 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 HAAOP46952 286 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 H3F3AP84243 136 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CD226Q15762 336 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 TIGITQ495A1 244 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CT45A2Q5DJT8 189 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CT45A1Q5HYN5 189 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 DCAF12Q5T6F0 453 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 LILRA6Q6PI73 481 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CATSPERDQ86XM0 798 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 SPICQ8N5J4 248 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 OR2AE1Q8NHA4 323 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CT45A3Q8NHU0 189 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 ARHGAP5-AS1Q96IT6 56 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 ZDHHC11Q9H8X9 412 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 DSPPQ9NZW4 1301 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 FABP1P07148 127 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 UBE2G1P62253 170 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF273Q14593 569 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 EMC4Q5J8M3 183 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 TMEM18Q96B42 140 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 ALKBH3Q96Q83 286 aaPredicted RBP11.53□□□□□ -0.56
SCN1B-202ENST00000415950 C19orf43Q9BQ61 176 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 NMES1Q9C002 83 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 RIMS4Q9H426 269 aaPredicted RBP11.53□□□□□ -0.56
SCN1B-202ENST00000415950 LHX9Q9NQ69 397 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 ARL2-SNX15V9GYD0 113 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 CRYBA1P05813 215 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 FAM53BQ14153 422 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF66Q6ZN08 573 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 SMIM15Q7Z3B0 74 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 FBXL14Q8N1E6 418 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 SIGLECL1Q8N7X8 197 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 SLC25A43Q8WUT9 341 aaPredicted RBP11.53□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF251Q9BRH9 671 aa11.53□□□□□ -0.56
SCN1B-202ENST00000415950 hCG_1809904A0A1W2PP81 198 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 A0A1W2PR64 198 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 A0A1W2PRV1 198 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 NPIPB8E9PQR5 432 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 NKX2-2O95096 273 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 SPP1P10451 314 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 BMP5P22003 454 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 PSG6Q00889 435 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 PRICKLE4Q2TBC4 344 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 BTNL8Q6UX41 500 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 GPX8Q8TED1 209 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 MRGPRX1Q96LB2 322 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF586Q9NXT0 402 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 DTX4Q9Y2E6 619 aa11.52□□□□□ -0.56
SCN1B-202ENST00000415950 STRAPQ9Y3F4 350 aaKnown RBP11.52□□□□□ -0.56
SCN1B-202ENST00000415950 TRAV34A0A0B4J273 112 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 NUDT19A8MXV4 375 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 ARPC3O15145 178 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 CISD3P0C7P0 127 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 CLN3Q13286 438 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 SHBQ15464 509 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 NR2C2APQ86WQ0 139 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 OR11L1Q8NGX0 322 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 HGDQ93099 445 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 OBP2AQ9NY56 170 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 IGKV1-8A0A0C4DH67 115 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 A0A1W2PNV4 684 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 C9orf170A2RU37 121 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 RER1O15258 196 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 OGG1O15527 345 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms