RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CALHM1Q8IU99 346 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 ERI1Q8IV48 349 aaKnown RBP12.43□□□□□ -0.42
DDX56-202ENST00000415758 OR2T33Q8NG76 320 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 HIST1H2AAQ96QV6 131 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 PRSS22Q9GZN4 317 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 YY1AP1Q9H869 796 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 TBC1D23Q9NUY8 699 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 SASH3O75995 380 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 IFNGP01579 166 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 PRDX6P30041 224 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 GSTT1P30711 240 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 SAMD4BQ5PRF9 694 aaKnown RBP12.42□□□□□ -0.42
DDX56-202ENST00000415758 THAP5Q7Z6K1 395 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.42□□□□□ -0.42
DDX56-202ENST00000415758 DYNAPQ8N1N2 210 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 ZNF561Q8N587 486 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 AQP3Q92482 292 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 MALSU1Q96EH3 234 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 NSMCE2Q96MF7 247 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 MYLK2Q9H1R3 596 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 CMC2Q9NRP2 79 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 USE1Q9NZ43 259 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 PITPNC1Q9UKF7 332 aa12.42□□□□□ -0.42
DDX56-202ENST00000415758 RFPL4AA6NLU0 287 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 RIIAD1A6NNX1 92 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 ZNF732B4DXR9 585 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 RFPL4AL1F8VTS6 287 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 K7EIL1 84 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 TNFRSF11BO00300 401 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 ARPC2O15144 300 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 MPIG6BO95866 241 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 H2AFXP16104 143 aaPredicted RBP12.41□□□□□ -0.42
DDX56-202ENST00000415758 ZNF3P17036 446 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 RAB13P51153 203 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 ERVFRD-1P60508 538 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 CD83Q01151 205 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 ZBTB37Q5TC79 503 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 ACP7Q6ZNF0 438 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 LHFPL4Q7Z7J7 247 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 CD177Q8N6Q3 437 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 OR8B12Q8NGG6 310 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 OR5A2Q8NGI9 324 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 OTOSQ8NHW6 89 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 RPS4Y2Q8TD47 263 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 DGCR6LQ9BY27 220 aa12.41□□□□□ -0.42
DDX56-202ENST00000415758 TBL2Q9Y4P3 447 aaKnown RBP12.41□□□□□ -0.42
DDX56-202ENST00000415758 OR5B21A6NL26 309 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 FAM183AA6NL82 134 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 C17orf98A8MV24 154 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 CCNB2O95067 398 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 LYNP07948 512 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 IGLL1P15814 213 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 CD33P20138 364 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 COX7A1P24310 79 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 MSX2P35548 267 aaPredicted RBP12.4□□□□□ -0.42
DDX56-202ENST00000415758 MAP2K3P46734 347 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 DYNLT3P51808 116 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 CAPZA1P52907 286 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 ZNF454Q8N9F8 522 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 AQP11Q8NBQ7 271 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 FOXRED1Q96CU9 486 aaPredicted RBP12.4□□□□□ -0.42
DDX56-202ENST00000415758 NIPAL2Q9H841 368 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 ARMC1Q9NVT9 282 aa12.4□□□□□ -0.42
DDX56-202ENST00000415758 ARGLU1Q9NWB6 273 aaPredicted RBP12.4□□□□□ -0.42
DDX56-202ENST00000415758 A0A0U1RQV5 110 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 ODF3BA8MYP8 253 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 SLC1A7O00341 560 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 NOS1APO75052 506 aaPredicted RBP12.39□□□□□ -0.43
DDX56-202ENST00000415758 PEX14O75381 377 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 SOX14O95416 240 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 CCL3L1P16619 93 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 PRDX2P32119 198 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 MAGEA2P43356 314 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 DLX6P56179 175 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 PSMA6P60900 246 aaKnown RBP12.39□□□□□ -0.43
DDX56-202ENST00000415758 BLCAPP62952 87 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 ZNF273Q14593 569 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 SMIM21Q3B7S5 101 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 LDLRAD2Q5SZI1 272 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 Q6ZS46 218 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 TMEM219Q86XT9 240 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 POC1AQ8NBT0 407 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 OR11H6Q8NGC7 330 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 OR4M1Q8NGD0 313 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 OR2T27Q8NH04 317 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 OCSTAMPQ9BR26 566 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 MED20Q9H944 212 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 ABCB10Q9NRK6 738 aa12.39□□□□□ -0.43
DDX56-202ENST00000415758 ACOD1A6NK06 481 aa12.38□□□□□ -0.43
DDX56-202ENST00000415758 RBP4P02753 201 aa12.38□□□□□ -0.43
DDX56-202ENST00000415758 ALDOBP05062 364 aa12.38□□□□□ -0.43
DDX56-202ENST00000415758 ATP6V1B1P15313 513 aa12.38□□□□□ -0.43
DDX56-202ENST00000415758 MICAQ29983 383 aa12.38□□□□□ -0.43
DDX56-202ENST00000415758 CEP78Q5JTW2 689 aa12.38□□□□□ -0.43
DDX56-202ENST00000415758 ZNF626Q68DY1 528 aa12.38□□□□□ -0.43
DDX56-202ENST00000415758 C11orf87Q6NUJ2 197 aa12.38□□□□□ -0.43
DDX56-202ENST00000415758 HAGHLQ6PII5 290 aaPredicted RBP12.38□□□□□ -0.43
DDX56-202ENST00000415758 CD300LDQ6UXZ3 194 aa12.38□□□□□ -0.43
DDX56-202ENST00000415758 THEM6Q8WUY1 208 aa12.38□□□□□ -0.43
DDX56-202ENST00000415758 DSCAML1Q8TD84 2053 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms