RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 SRRQ9GZT4 340 aa12.2□□□□□ -0.46
HMGA1P1-201ENST00000415560 PPP1R3EQ9H7J1 279 aa12.2□□□□□ -0.46
HMGA1P1-201ENST00000415560 MYEF2Q9P2K5 600 aaKnown RBP12.2□□□□□ -0.46
HMGA1P1-201ENST00000415560 DSPP15924 2871 aaKnown RBP12.2□□□□□ -0.46
HMGA1P1-201ENST00000415560 IGKV1-27A0A075B6S5 117 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 UPK1BO75841 260 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 HTR3BO95264 441 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 MPIG6BO95866 241 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 GTF2F2P13984 249 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 CDK2P24941 298 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 MNDAP41218 407 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 HAAOP46952 286 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 MMP15P51511 669 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 QRFPP83859 136 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 SLC22A6Q4U2R8 563 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 Q8N402 240 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 ZNF843Q8N446 348 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 C19orf18Q8NEA5 215 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 OR56B1Q8NGI3 324 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 TMEM171Q8WVE6 324 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 ITLN2Q8WWU7 325 aaPredicted RBP12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 MRPS24Q96EL2 167 aaKnown RBP12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 POM121Q96HA1 1249 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 BBC3Q96PG8 261 aaPredicted RBP12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 PKIBQ9C010 78 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 CXXC4Q9H2H0 198 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 ZNF442Q9H7R0 627 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 ABCB10Q9NRK6 738 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 IL36GQ9NZH8 169 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 FZR1Q9UM11 496 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 PKD1L2Q7Z442 2459 aa12.19□□□□□ -0.46
HMGA1P1-201ENST00000415560 ACACBO00763 2458 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 IGLV3-9A0A075B6K5 115 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 A0A0G2JMP0 313 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 A0A0X1KG70 313 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 ISPDA4D126 451 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 LRP5LA4QPB2 252 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 TRAPPC2LH3BP13 241 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 H3BUI4 141 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 CTDSPLO15194 276 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 SPRY1O43609 319 aaPredicted RBP12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 CDC14BO60729 498 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 PLATP00750 562 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 PRB1P04280 392 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 SERPINA2P20848 420 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 EFNB2P52799 333 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 DEFA1P59665 94 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 DEFA3P59666 94 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 SCN1BQ07699 218 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 ARL6IP1Q15041 203 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 ZNF79Q15937 498 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 ALKBH6Q3KRA9 238 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 HACD4Q5VWC8 232 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 TRIQKQ629K1 86 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 OR10K2Q6IF99 312 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 RNF144BQ7Z419 303 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 TMEM200AQ86VY9 491 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 ZNF611Q8N823 705 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 DTX3Q8N9I9 347 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 OR4M2Q8NGB6 313 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 OR51T1Q8NGJ9 327 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 HPSE2Q8WWQ2 592 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 MRPL24Q96A35 216 aaKnown RBP12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 NUDT16L1Q9BRJ7 211 aaKnown RBP12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 RHOFQ9HBH0 211 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 CA10Q9NS85 328 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 TAAR3PQ9P1P4 343 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 CACNA1BQ00975 2339 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 HCFC1P51610 2035 aa12.18□□□□□ -0.46
HMGA1P1-201ENST00000415560 COL6A6A6NMZ7 2263 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 TPRP12270 2363 aaKnown RBP12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 TRAV18A0A075B6X5 111 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 LILRA1O75019 489 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 MGMTP16455 207 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 TNFSF4P23510 183 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 CPT2P23786 658 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 TAS2R20P59543 309 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 RPS27AP62979 156 aaKnown RBP12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 TFF3Q07654 80 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 IL24Q13007 206 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 UNC119Q13432 240 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 FAM76BQ5HYJ3 339 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 CRIP3Q6Q6R5 217 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 SLC25A26Q70HW3 274 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 C1QL2Q7Z5L3 287 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 OSR2Q8N2R0 312 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 FCAMRQ8WWV6 532 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 DVL3Q92997 716 aaPredicted RBP12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 THAP7Q9BT49 309 aaPredicted RBP12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 OR51I2Q9H344 312 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 KCNK15Q9H427 330 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 PLK3Q9H4B4 646 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 BANF2Q9H503 90 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 CRIM1Q9NZV1 1036 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 POLDIP2Q9Y2S7 368 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 BOD1L1Q8NFC6 3051 aa12.17□□□□□ -0.46
HMGA1P1-201ENST00000415560 RP1L1Q8IWN7 2480 aaPredicted RBP12.16□□□□□ -0.46
HMGA1P1-201ENST00000415560 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.16□□□□□ -0.46
HMGA1P1-201ENST00000415560 J3QT63 122 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms