RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 POLR2GP62487 172 aaKnown RBP eCLIP15.47■□□□□ 0.07
SDCBP-202ENST00000413219 C14orf28Q4W4Y0 310 aa15.47■□□□□ 0.07
SDCBP-202ENST00000413219 FBXO46Q6PJ61 603 aaPredicted RBP15.47■□□□□ 0.07
SDCBP-202ENST00000413219 GALNTL5Q7Z4T8 443 aa15.47■□□□□ 0.07
SDCBP-202ENST00000413219 OR1J1Q8NGS3 322 aa15.47■□□□□ 0.07
SDCBP-202ENST00000413219 PP6455Q8WZ26 134 aa15.47■□□□□ 0.07
SDCBP-202ENST00000413219 ERGIC1Q969X5 290 aa15.47■□□□□ 0.07
SDCBP-202ENST00000413219 SMIM3Q9BZL3 60 aa15.47■□□□□ 0.07
SDCBP-202ENST00000413219 ZNF701Q9NV72 531 aaPredicted RBP15.47■□□□□ 0.07
SDCBP-202ENST00000413219 V9GYS6 101 aa15.47■□□□□ 0.07
SDCBP-202ENST00000413219 ARID1BQ8NFD5 2236 aaPredicted RBP15.46■□□□□ 0.07
SDCBP-202ENST00000413219 A0A0U1RQV5 110 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 A6NLC8 198 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 STMND1H3BQB6 276 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 GPR137BO60478 399 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 CBR1P16152 277 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 LMO1P25800 156 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 MAS1LP35410 378 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 P2RY1P47900 373 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 STARD6P59095 220 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 RAB1AP62820 205 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 ZNF239Q16600 458 aaKnown RBP15.46■□□□□ 0.07
SDCBP-202ENST00000413219 PLPPR5Q32ZL2 321 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 C1orf189Q5VU69 101 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 C16orf47Q6ZP98 133 aaPredicted RBP15.46■□□□□ 0.07
SDCBP-202ENST00000413219 Q6ZSR3 168 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 APCDD1LQ8NCL9 501 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 CCDC54Q8NEL0 328 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 SNIP1Q8TAD8 396 aaKnown RBP15.46■□□□□ 0.07
SDCBP-202ENST00000413219 PGAM5Q96HS1 289 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 S100A13Q99584 98 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 CLEC1BQ9P126 229 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 PADI1Q9ULC6 663 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 KCNIP3Q9Y2W7 256 aa15.46■□□□□ 0.07
SDCBP-202ENST00000413219 IGKV1D-8A0A087WSZ0 117 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 IGLV3-32A0A0A0MS00 114 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 A0A1B0GW64 132 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 A0A1W2PPE3 182 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 A0A1W2PPH5 198 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 EPOPA6NHQ4 379 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 SHISA8B8ZZ34 492 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 M0R036 132 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 SERPINA2P20848 420 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 CAMLGP49069 296 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 OR5D18Q8NGL1 313 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 POC1BQ8TC44 478 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 TCTEX1D2Q8WW35 142 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 MRPL38Q96DV4 380 aaKnown RBP15.45■□□□□ 0.06
SDCBP-202ENST00000413219 GALNT14Q96FL9 552 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 OXGR1Q96P68 337 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 IP6K3Q96PC2 410 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 PBDC1Q9BVG4 233 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 MCTS1Q9ULC4 181 aaKnown RBP15.45■□□□□ 0.06
SDCBP-202ENST00000413219 DHRS7CA6NNS2 312 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 NME2P1O60361 137 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 MBPP02686 304 aaPredicted RBP15.45■□□□□ 0.06
SDCBP-202ENST00000413219 ZNF43P17038 809 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 KRBOX4Q5JUW0 171 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 C7orf61Q8IZ16 206 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 LRTM2Q8N967 370 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 SLC38A9Q8NBW4 561 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 HAS2Q92819 552 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 C10orf35Q96D05 121 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 LYZL4Q96KX0 146 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 TGIF2Q9GZN2 237 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 C19orf12Q9NSK7 152 aa15.45■□□□□ 0.06
SDCBP-202ENST00000413219 LMO7DNF2Z398 122 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 MASP2O00187 686 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 DHRS3O75911 302 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 QDPRP09417 244 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 EIF2S3P41091 472 aaKnown RBP15.44■□□□□ 0.06
SDCBP-202ENST00000413219 LSM6P62312 80 aaKnown RBP15.44■□□□□ 0.06
SDCBP-202ENST00000413219 SLC35A1P78382 337 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 ZNF616Q08AN1 781 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 SMAD4Q13485 552 aaKnown RBP15.44■□□□□ 0.06
SDCBP-202ENST00000413219 RPUSD3Q6P087 351 aaKnown RBP15.44■□□□□ 0.06
SDCBP-202ENST00000413219 HIST2H3AQ71DI3 136 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 C1QL4Q86Z23 238 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 LINC00469Q8N7U9 141 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 LFNGQ8NES3 379 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 NFAM1Q8NET5 270 aaPredicted RBP15.44■□□□□ 0.06
SDCBP-202ENST00000413219 CHST5Q9GZS9 411 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 EIF5A2Q9GZV4 153 aaKnown RBP15.44■□□□□ 0.06
SDCBP-202ENST00000413219 SLC35B3Q9H1N7 401 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 SMDT1Q9H4I9 107 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 SEMA5BQ9P283 1151 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 ANXA10Q9UJ72 324 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 RP1P56715 2156 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 IGHV3-20A0A0C4DH32 117 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 LOC102725191A0A1B0GVB3 256 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 UMAD1C9J7I0 102 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 AP4M1O00189 453 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 OR8U8P0C7N1 319 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 FCGR2AP12318 317 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 FOLR1P15328 257 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 TMEM187Q14656 261 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 DEFB133Q30KQ1 61 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 FAM209BQ5JX69 171 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 CARD17Q5XLA6 110 aa15.44■□□□□ 0.06
SDCBP-202ENST00000413219 PLXDC1Q8IUK5 500 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms