RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 FBXL14Q8N1E6 418 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 TPRX1Q8N7U7 411 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 APOBEC3DQ96AK3 386 aaPredicted RBP8.36□□□□□ -1.07
SMPD4-203ENST00000412570 RBMXL1Q96E39 390 aaKnown RBP8.36□□□□□ -1.07
SMPD4-203ENST00000412570 WFIKKN1Q96NZ8 548 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 CHST6Q9GZX3 395 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 ABCG5Q9H222 651 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 TRBV5-7A0A0A0MS05 114 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 MBD3L4A6NDZ8 208 aaPredicted RBP8.36□□□□□ -1.07
SMPD4-203ENST00000412570 MBD3L3A6NE82 208 aaPredicted RBP8.36□□□□□ -1.07
SMPD4-203ENST00000412570 MBD3L5A6NJ08 208 aaPredicted RBP8.36□□□□□ -1.07
SMPD4-203ENST00000412570 C16orf97H3BN30 126 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 BLVRBP30043 206 aaPredicted RBP8.36□□□□□ -1.07
SMPD4-203ENST00000412570 PSG7Q13046 419 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 RIN1Q13671 783 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 UNQ9370/PRO34162Q6UXP9 181 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 MRGPRGQ86SM5 289 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 MBD3L2Q8NHZ7 208 aaPredicted RBP8.36□□□□□ -1.07
SMPD4-203ENST00000412570 ENKURQ8TC29 256 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 KLF14Q8TD94 323 aaPredicted RBP8.36□□□□□ -1.07
SMPD4-203ENST00000412570 CCDC107Q8WV48 283 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 VRK1Q99986 396 aaPredicted RBP8.36□□□□□ -1.07
SMPD4-203ENST00000412570 C11orf54Q9H0W9 315 aaPredicted RBP8.36□□□□□ -1.07
SMPD4-203ENST00000412570 FLVCR2Q9UPI3 526 aa8.36□□□□□ -1.07
SMPD4-203ENST00000412570 IGHV3OR15-7A0A075B7D8 119 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 SDCBPO00560 298 aaPredicted RBP8.35□□□□□ -1.07
SMPD4-203ENST00000412570 UPK1BO75841 260 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 RFX2P48378 723 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 KCNMB1Q16558 191 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 ADGRE4PQ86SQ3 457 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 TPRA1Q86W33 373 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 OR4D10Q8NGI6 311 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 ADAM30Q9UKF2 790 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 FAM240BA0A1B0GVZ2 78 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 TAS2R20P59543 309 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 PRB3Q04118 309 aaPredicted RBP8.35□□□□□ -1.07
SMPD4-203ENST00000412570 BSPH1Q075Z2 132 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 MSMPQ1L6U9 139 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 PCSK4Q6UW60 755 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 TOMM5Q8N4H5 51 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 ARHGAP5-AS1Q96IT6 56 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 SORCS2Q96PQ0 1159 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 TMEM59Q9BXS4 323 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 LINC00470Q9BZP3 86 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 SRRQ9GZT4 340 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 PLSCR4Q9NRQ2 329 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 TRAV1-2A0A0B4J238 106 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 LYNX1G3V0Z9 82 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 SLC17A2O00624 439 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 GEMIN2O14893 280 aaKnown RBP8.35□□□□□ -1.07
SMPD4-203ENST00000412570 RLN1P04808 185 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 LYNX1P0DP58 116 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 MGMTP16455 207 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 PI3P19957 117 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 CCKARP32238 428 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 UBE2MP61081 183 aaKnown RBP8.35□□□□□ -1.07
SMPD4-203ENST00000412570 ECH1Q13011 328 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 UNC119Q13432 240 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 PCGF3Q3KNV8 242 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 Q6ZTK2 550 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 TMED4Q7Z7H5 227 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 FAM219AQ8IW50 185 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 FAM210AQ96ND0 272 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 FAAP24Q9BTP7 215 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 TMPRSS13Q9BYE2 586 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 DCAF16Q9NXF7 216 aa8.35□□□□□ -1.07
SMPD4-203ENST00000412570 PAIP2BQ9ULR5 123 aaKnown RBP8.35□□□□□ -1.07
SMPD4-203ENST00000412570 HRNRQ86YZ3 2850 aaPredicted RBP8.35□□□□□ -1.07
SMPD4-203ENST00000412570 SIRPB1O00241 398 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 SMPD2O60906 423 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 GTF2F2P13984 249 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 ZNF44P15621 663 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 PTGFRP43088 359 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 RBP2P50120 134 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 CDNFQ49AH0 187 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 CCBE1Q6UXH8 406 aaPredicted RBP8.34□□□□□ -1.07
SMPD4-203ENST00000412570 ZBTB8BQ8NAP8 495 aaPredicted RBP8.34□□□□□ -1.07
SMPD4-203ENST00000412570 NEURL2Q9BR09 285 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 DIABLOQ9NR28 239 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 KCNN3Q9UGI6 736 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.34□□□□□ -1.071e-6■■■■□ 22.5
SMPD4-203ENST00000412570 IGHV2OR16-5A0A0B4J2B6 119 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 LOC100289279A0A1B0GTE1 492 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 hCG_38984A0A1B0GV85 526 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 CTAG2O75638 210 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 CGAP01215 116 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 APOC1P02654 83 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 PRKACAP17612 351 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 BCL3P20749 454 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 GIFP27352 417 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 OR8G1Q15617 311 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 ZNF324BQ6AW86 544 aaPredicted RBP8.34□□□□□ -1.07
SMPD4-203ENST00000412570 C17orf107Q6ZR85 190 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 LRRC28Q86X40 367 aaPredicted RBP8.34□□□□□ -1.07
SMPD4-203ENST00000412570 OR56B4Q8NH76 319 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 PIK3IP1Q96FE7 263 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 ADAT1Q9BUB4 502 aaKnown RBP8.34□□□□□ -1.07
SMPD4-203ENST00000412570 ZNF442Q9H7R0 627 aa8.34□□□□□ -1.07
SMPD4-203ENST00000412570 CHMP1AQ9HD42 196 aaPredicted RBP8.34□□□□□ -1.07
SMPD4-203ENST00000412570 PLEKHA6Q9Y2H5 1048 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms