RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SOSTQ9BQB4 213 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 TMED9Q9BVK6 235 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 TAPBPLQ9BX59 468 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 CDCA4Q9BXL8 241 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 UGT2B28Q9BY64 529 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 BCL2L14Q9BZR8 327 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 OR11A1Q9GZK7 315 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 LHX5Q9H2C1 402 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 METTL17Q9H7H0 456 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-204ENST00000412061 IL37Q9NZH6 218 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 DNAJC27Q9NZQ0 273 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 PAK5Q9P286 719 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 SLC22A13Q9Y226 551 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 VWA8A3KMH1 1905 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 ZNF608Q9ULD9 1512 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-204ENST00000412061 HCFC1P51610 2035 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 EFCAB9A8MZ26 197 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 CXCR6O00574 342 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 MYL12BO14950 172 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 RAD1O60671 282 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 UGT2B11O75310 529 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 SERF1AO75920 110 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 GAS8-AS1O95177 125 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 TYMSP04818 313 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 CDK1P06493 297 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 P2RY4P51582 365 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 CYP24A1Q07973 514 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 INCA1Q0VD86 236 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 TSPAN31Q12999 210 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 SHHQ15465 462 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 TTMPQ5BVD1 217 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 CASC10Q5T4H9 136 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 HHATQ5VTY9 493 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 METTL21CQ5VZV1 264 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 CGB2Q6NT52 195 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 FBXW12Q6X9E4 464 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 FAM92BQ6ZTR7 304 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 H2AFVQ71UI9 128 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 RIBC1Q8N443 379 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-204ENST00000412061 ACBD4Q8NC06 268 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 ZNF485Q8NCK3 441 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 NEIL3Q8TAT5 605 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 PIGXQ8TBF5 258 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 PIFOQ8TCI5 191 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 C7orf33Q8WU49 177 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 PACRGQ96M98 296 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-204ENST00000412061 METTL26Q96S19 204 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 STACQ99469 402 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 RHOFQ9HBH0 211 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 TMEM27Q9HBJ8 222 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 DIABLOQ9NR28 239 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 FBXO6Q9NRD1 293 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-204ENST00000412061 FAM49BQ9NUQ9 324 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 COMMD9Q9P000 198 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 UVRAGQ9P2Y5 699 aa3.32□□□□□ -1.88
BRCA1-204ENST00000412061 NFASCO94856 1347 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 WDR62O43379 1518 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.31□□□□□ -1.88
BRCA1-204ENST00000412061 TRAV8-6A0A0B4J262 113 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 DAPL1A0PJW8 107 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 PEX7O00628 323 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 TCAPO15273 167 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 FAM189A1O60320 539 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 BCHEP06276 602 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 RPS12P25398 132 aaKnown RBP3.31□□□□□ -1.88
BRCA1-204ENST00000412061 TSPOP30536 169 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 DRD3P35462 400 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 CAPZBP47756 277 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 TTPAP49638 278 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 CDKN2DP55273 166 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 CXCR4P61073 352 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 UBE2NP61088 152 aaKnown RBP3.31□□□□□ -1.88
BRCA1-204ENST00000412061 ERVS71-1P61550 626 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 LSM6P62312 80 aaKnown RBP3.31□□□□□ -1.88
BRCA1-204ENST00000412061 SLC7A9P82251 487 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 AESQ08117 197 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 C4orf26Q17RF5 130 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 CEACAM16Q2WEN9 425 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 HLA-DRB5Q30154 266 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 SLC25A35Q3KQZ1 300 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 SPIN4Q56A73 249 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 AVPI1Q5T686 147 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 FBXW9Q5XUX1 488 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 CD200R1LQ6Q8B3 271 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 TMEM179BQ7Z7N9 219 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 SLC13A5Q86YT5 568 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-204ENST00000412061 TRAPPC5Q8IUR0 188 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 STPG2Q8N412 459 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 ERMNQ8TAM6 284 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 MARC2Q969Z3 335 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 RERGQ96A58 199 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-204ENST00000412061 TMEM159Q96B96 161 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 TESCQ96BS2 214 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 DCPSQ96C86 337 aaKnown RBP3.31□□□□□ -1.88
BRCA1-204ENST00000412061 DGCR14Q96DF8 476 aaKnown RBP3.31□□□□□ -1.88
BRCA1-204ENST00000412061 OR2M4Q96R27 311 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 TAAR1Q96RJ0 339 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 ATOH8Q96SQ7 321 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 SLC25A2Q9BXI2 301 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms