RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CDCA4Q9BXL8 241 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 PCGF6Q9BYE7 350 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 TTTY10Q9BZA0 68 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 DPH1Q9BZG8 443 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 NXF2Q9GZY0 626 aaKnown RBP-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 BLZF1Q9H2G9 400 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 PPIL3Q9H2H8 161 aaKnown RBP-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 TAF1DQ9H5J8 278 aaPredicted RBP-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 COQ10BQ9H8M1 238 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 RHOFQ9HBH0 211 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 UBE2TQ9NPD8 197 aaPredicted RBP-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 ASCL3Q9NQ33 180 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 TMOD4Q9NZQ9 345 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 EIF3KQ9UBQ5 218 aaKnown RBP-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 IL36AQ9UHA7 158 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 KIF25Q9UIL4 384 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 DBNLQ9UJU6 430 aaKnown RBP-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 NUP50Q9UKX7 468 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 PSG8Q9UQ74 426 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 KDM3AQ9Y4C1 1321 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 AKAP11Q9UKA4 1901 aa-2.27□□□□□ -2.77
RNU4-88P-201ENST00000411220 THSD7AQ9UPZ6 1657 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 IRGMA1A4Y4 181 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 EIF4E1BA6NMX2 242 aaKnown RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 TRIM77I1YAP6 450 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 M0R233 179 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 SNAP23O00161 211 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 VCYO14598 125 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 OGG1O15527 345 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 XRCC3O43542 346 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 XRCC2O43543 280 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 EIF5BO60841 1220 aaKnown RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 PEX11AO75192 247 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 MT-ND3P03897 115 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 FABP3P05413 133 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 URODP06132 367 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAM228BP0C875 321 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 IGHV3-43DP0DP04 118 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 AREGP15514 252 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 CASP1P29466 404 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 ARR3P36575 388 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 SPAM1P38567 509 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 CETN2P41208 172 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 VDAC2P45880 294 aaPredicted RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 DHPSP49366 369 aaPredicted RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 DAP3P51398 398 aaKnown RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 FGF8P55075 233 aaPredicted RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 RPS21P63220 83 aaKnown RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 GALNT1Q10472 559 aaPredicted RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 NME3Q13232 169 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 NAE1Q13564 534 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 FRG1Q14331 258 aaKnown RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 ZNF846Q147U1 533 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 CRYMQ14894 314 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 NAA25Q14CX7 972 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 PON2Q15165 354 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR8G1Q15617 311 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 TWISTNBQ3B726 338 aaPredicted RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 VPS26BQ4G0F5 336 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 ORMDL2Q53FV1 153 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 GCNT6Q5T4J0 391 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 C1orf134Q5TEV5 83 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 ATL3Q6DD88 541 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 SLC8B1Q6J4K2 584 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 Q6Q795 121 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 TMEM14EPQ6UXP3 125 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 PQLC2Q6ZP29 291 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 P4HA3Q7Z4N8 544 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 COMMD2Q86X83 199 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 CBLN2Q8IUK8 224 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 APRG1Q8IVJ8 170 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 SLC35F3Q8IY50 421 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 TEX26Q8N6G2 289 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 CNEP1R1Q8N9A8 125 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR4M1Q8NGD0 313 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR5A1Q8NGJ0 315 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR1N2Q8NGR9 330 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 PPTC7Q8NI37 304 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 GPR148Q8TDV2 347 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 CLEC4CQ8WTT0 213 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 CCDC107Q8WV48 283 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 SMPDL3AQ92484 453 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 BCL2L2Q92843 193 aaPredicted RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 CCDC127Q96BQ5 260 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 SGK3Q96BR1 496 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 MTERF3Q96E29 417 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 ADAT3Q96EY9 351 aaPredicted RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAM227BQ96M60 508 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 KLHL15Q96M94 604 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR4K3Q96R72 315 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 DSCR8Q96T75 97 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 NUDT16L1Q9BRJ7 211 aaKnown RBP-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 PAGR1Q9BTK6 254 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 TMEM120AQ9BXJ8 343 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 DEFB129Q9H1M3 183 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 DEFB127Q9H1M4 99 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 CCDC68Q9H2F9 335 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR51B6Q9H340 312 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 SLA2Q9H6Q3 261 aa-2.28□□□□□ -2.77
RNU4-88P-201ENST00000411220 DYRK4Q9NR20 520 aa-2.28□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms