RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 A0A0U1RQV1 116 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 CENPVL1A0A0U1RR11 272 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 CENPVL3A0A0U1RRI6 287 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 TCP10L2B9ZVM9 353 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 USP17L23D6RBM5 183 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 F6UB75 175 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 H3BP45 60 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 CDC42EP2O14613 210 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 GABARAPO95166 117 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 IQCF3P0C7M6 154 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 HLA-DOBP13765 273 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 TIA1P31483 386 aaKnown RBP eCLIP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 FXYD6P3P58550 94 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 SEMG2Q02383 582 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 TCP10Q12799 353 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 TMEM136Q6ZRR5 245 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 FAM231DQ6ZW35 169 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 C1orf186Q6ZWK4 172 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 PRICKLE2Q7Z3G6 844 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 SYS1Q8N2H4 156 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 MFSD4AQ8N468 514 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 GJC3Q8NFK1 279 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 OR2T29Q8NH02 315 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 OR5K2Q8NHB8 316 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 GPBAR1Q8TDU6 330 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 FLYWCH2Q96CP2 140 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 SMIM19Q96E16 107 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 MGST2Q99735 147 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 S1PR5Q9H228 398 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 ZNF319Q9P2F9 582 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 B4GALT7Q9UBV7 327 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 NAT8BQ9UHF3 227 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 VAX2Q9UIW0 290 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 TMED7Q9Y3B3 224 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 MTCH2Q9Y6C9 303 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 A0A096LPE4 126 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 A0A1W2PPZ6 126 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 F5H6K3 240 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 SPRY1O43609 319 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 EEDO75530 441 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 EN2P19622 333 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 MALP21145 153 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 FBLN1P23142 703 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 RPL27P61353 136 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 PLPPR5Q32ZL2 321 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 ADAMTSL5Q6ZMM2 481 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 H2BFWTQ7Z2G1 175 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 OR1B1Q8NGR6 318 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 NEIL3Q8TAT5 605 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 TMED6Q8WW62 240 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 SCAMP4Q969E2 229 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 RBMXL1Q96E39 390 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 ZNF300Q96RE9 604 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 SNHG12Q9BXW3 62 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 WDR61Q9GZS3 305 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 RHOJQ9H4E5 214 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 LHX3Q9UBR4 397 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 PLEKHB1Q9UF11 243 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 LRP12Q9Y561 859 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 F11RQ9Y624 299 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 HECW2Q9P2P5 1572 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 ARHGEF28Q8N1W1 1705 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 OR2W5A6NFC9 320 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 EML2O95834 649 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 OPN1SWP03999 348 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 CD247P20963 164 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 ACP1P24666 158 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 HERVK_113P61574 105 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 KHDC3LQ587J8 217 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 TMEM196Q5HYL7 178 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 PARM1Q6UWI2 310 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 SBSNQ6UWP8 590 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 STRADAQ7RTN6 431 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 SPNS2Q8IVW8 549 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 B3GALNT2Q8NCR0 500 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 OR2AJ1Q8NGZ0 328 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 HIST1H2BAQ96A08 127 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 CCDC140Q96MF4 163 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 PRAP1Q96NZ9 151 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 C1QTNF2Q9BXJ5 285 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 SLC25A39Q9BZJ4 359 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 NAA60Q9H7X0 242 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 TTC24A2A3L6 582 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 PRSS23O95084 383 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 SP1P08047 785 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 ITGA5P08648 1049 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 ZNF19P17023 458 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 GM2AP17900 193 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 SLC37A1P57057 533 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 RPS15AP62244 130 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 OC90Q02509 493 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 PIGFQ07326 219 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 ST3GAL1Q11201 340 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 ECSCRQ19T08 205 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 DLEU7Q6UYE1 221 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 C9orf40Q8IXQ3 194 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 BAHD1Q8TBE0 780 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 WFDC12Q8WWY7 111 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 IGSF8Q969P0 613 aa4.69□□□□□ -1.66
R3HDM1-204ENST00000410054 PPCDCQ96CD2 204 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms