RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 HOXB1P14653 301 aaPredicted RBP13.87□□□□□ -0.19
HOXD3-202ENST00000410016 HOXA6P31267 233 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 ARHGDIBP52566 201 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 MLF1P58340 268 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 ZFP36L1Q07352 338 aaKnown RBP13.87□□□□□ -0.19
HOXD3-202ENST00000410016 UQCC3Q6UW78 93 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 TMEM156Q8N614 296 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 OR2Y1Q8NGV0 311 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 EMG1Q92979 244 aaKnown RBP13.87□□□□□ -0.19
HOXD3-202ENST00000410016 ZNF775Q96BV0 537 aaPredicted RBP13.87□□□□□ -0.19
HOXD3-202ENST00000410016 NECAB3Q96P71 396 aaPredicted RBP13.87□□□□□ -0.19
HOXD3-202ENST00000410016 DKKL1Q9UK85 242 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 RAB19A4D1S5 217 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 PMS2P1A4D2B8 440 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 DHRS7CA6NNS2 312 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 MSTNO14793 375 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 APOC1P02654 83 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 ZNF84P51523 738 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 SURF2Q15527 256 aaPredicted RBP13.87□□□□□ -0.19
HOXD3-202ENST00000410016 DRAM2Q6UX65 266 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 GALNTL5Q7Z4T8 443 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 POC1AQ8NBT0 407 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 CCDC54Q8NEL0 328 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 SPTSSAQ969W0 71 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 C2orf50Q96LR7 162 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 Q96M66 194 aa13.87□□□□□ -0.19
HOXD3-202ENST00000410016 FREM2Q5SZK8 3169 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 FAM157CP0CG43 387 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 B3GALT5-AS1P59052 145 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 MC2RQ01718 297 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 ARL6IP1Q15041 203 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 PPA1Q15181 289 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 CHRFAM7AQ494W8 412 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 SULF2Q8IWU5 870 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 AQP10Q96PS8 301 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 S100A13Q99584 98 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 ELL3Q9HB65 397 aaPredicted RBP13.86□□□□□ -0.19
HOXD3-202ENST00000410016 HPF1Q9NWY4 346 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 SYNGR3O43761 229 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 DEFA5Q01523 94 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 HGFACQ04756 655 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 RAB32Q13637 225 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 STK11Q15831 433 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 RPUSD3Q6P087 351 aaKnown RBP13.86□□□□□ -0.19
HOXD3-202ENST00000410016 FAM219AQ8IW50 185 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 OR51F2Q8NH61 342 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 SF3B5Q9BWJ5 86 aaKnown RBP13.86□□□□□ -0.19
HOXD3-202ENST00000410016 METTL8Q9H825 291 aaKnown RBP13.86□□□□□ -0.19
HOXD3-202ENST00000410016 DECR2Q9NUI1 292 aa13.86□□□□□ -0.19
HOXD3-202ENST00000410016 C9J4A7 227 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 RRP8O43159 456 aaKnown RBP13.85□□□□□ -0.19
HOXD3-202ENST00000410016 CFIP05156 583 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 RAC3P60763 192 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 SEMA6DQ8NFY4 1073 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 OR2AE1Q8NHA4 323 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 TMED6Q8WW62 240 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 HDHD3Q9BSH5 251 aaPredicted RBP13.85□□□□□ -0.19
HOXD3-202ENST00000410016 GPR173Q9NS66 373 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 ASF1BQ9NVP2 202 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 PLEKHJ1Q9NW61 149 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 NSG1A0A0A6YYJ2 146 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 TMEM218A2RU14 115 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 TOR1AO14656 332 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 KNG1P01042 644 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 GABRR1P24046 479 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 PTGER4P35408 488 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 MTCP1P56278 107 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 AIMP2Q13155 320 aaKnown RBP13.85□□□□□ -0.19
HOXD3-202ENST00000410016 NKAPLQ5M9Q1 402 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 RTL6Q6ICC9 239 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 CCDC36Q8IYA8 594 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 RNF141Q8WVD5 230 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 ZNF701Q9NV72 531 aaPredicted RBP13.85□□□□□ -0.19
HOXD3-202ENST00000410016 TRIOBPQ9H2D6 2365 aa13.85□□□□□ -0.19
HOXD3-202ENST00000410016 MUC3AQ02505 3323 aa13.84□□□□□ -0.19
HOXD3-202ENST00000410016 IGKV1-27A0A075B6S5 117 aa13.84□□□□□ -0.19
HOXD3-202ENST00000410016 SGCEO43556 437 aa13.84□□□□□ -0.19
HOXD3-202ENST00000410016 ACTL6AO96019 429 aa13.84□□□□□ -0.19
HOXD3-202ENST00000410016 CSTBP04080 98 aaKnown RBP13.84□□□□□ -0.19
HOXD3-202ENST00000410016 TRA2AQ13595 282 aaKnown RBP eCLIP13.84□□□□□ -0.19
HOXD3-202ENST00000410016 GPR137CQ8N3F9 429 aa13.84□□□□□ -0.19
HOXD3-202ENST00000410016 MAFAQ8NHW3 353 aaPredicted RBP13.84□□□□□ -0.19
HOXD3-202ENST00000410016 NARS2Q96I59 477 aaKnown RBP13.84□□□□□ -0.19
HOXD3-202ENST00000410016 SLC5A7Q9GZV3 580 aa13.84□□□□□ -0.19
HOXD3-202ENST00000410016 SLC6A15Q9H2J7 730 aa13.84□□□□□ -0.19
HOXD3-202ENST00000410016 CRLF2Q9HC73 371 aa13.84□□□□□ -0.19
HOXD3-202ENST00000410016 ZNF581Q9P0T4 197 aa13.84□□□□□ -0.19
HOXD3-202ENST00000410016 CCDC187A0A096LP49 1063 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 A0A0G2JMM0 328 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 A0A1W2PPB8 328 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 A0A1W2PRS3 328 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 FAM74A7A6NL05 159 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 KIR3DP1A8MWS1 328 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 PATE3B3GLJ2 98 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 YKT6O15498 198 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 DNPH1O43598 174 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 ATG12O94817 140 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 SERPINA5P05154 406 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 HOXB5P09067 269 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 TMEM225BP0DP42 221 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms