RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 VPREB3Q9UKI3 123 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 POMPQ9Y244 141 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 CCDC182A6NF36 153 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 RNASEK-C17orf49H0YIS7 233 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 DNAJC8O75937 253 aaPredicted RBP12.1□□□□□ -0.47
CBX3-203ENST00000409747 GABRA2P47869 451 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 UBE2E1P51965 193 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 HCCSP53701 268 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 ACTR3P61158 418 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 ACSM1Q08AH1 577 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 PLCXD3Q63HM9 321 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 DHRS7BQ6IAN0 325 aaPredicted RBP12.1□□□□□ -0.47
CBX3-203ENST00000409747 FAHD1Q6P587 224 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 OR5R1Q8NH85 324 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 OR51E1Q8TCB6 317 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 GPR84Q9NQS5 396 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 NUFIP1Q9UHK0 495 aaKnown RBP12.1□□□□□ -0.47
CBX3-203ENST00000409747 IKZF2Q9UKS7 526 aa12.1□□□□□ -0.47
CBX3-203ENST00000409747 SLC22A31A6NKX4 558 aa12.09□□□□□ -0.47
CBX3-203ENST00000409747 PSMD9O00233 223 aa12.09□□□□□ -0.47
CBX3-203ENST00000409747 RHBDL1O75783 438 aa12.09□□□□□ -0.47
CBX3-203ENST00000409747 DHRS3O75911 302 aa12.09□□□□□ -0.47
CBX3-203ENST00000409747 IGLV3-1P01715 115 aa12.09□□□□□ -0.47
CBX3-203ENST00000409747 PTGES3Q15185 160 aaKnown RBP12.09□□□□□ -0.47
CBX3-203ENST00000409747 SMIM21Q3B7S5 101 aa12.09□□□□□ -0.47
CBX3-203ENST00000409747 TMEM185AQ8NFB2 350 aa12.09□□□□□ -0.47
CBX3-203ENST00000409747 OR5D13Q8NGL4 314 aa12.09□□□□□ -0.47
CBX3-203ENST00000409747 LINC01006Q8NI28 216 aa12.09□□□□□ -0.47
CBX3-203ENST00000409747 AQP3Q92482 292 aa12.09□□□□□ -0.47
CBX3-203ENST00000409747 H2AFY2Q9P0M6 372 aaPredicted RBP12.09□□□□□ -0.47
CBX3-203ENST00000409747 PIGLQ9Y2B2 252 aa12.09□□□□□ -0.47
CBX3-203ENST00000409747 IGKV1D-17A0A075B6S4 117 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 A0A1W2PPH5 198 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 MEIOCA2RUB1 952 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 CLPXO76031 633 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 PSG2P11465 335 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 FAHP16930 419 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 SAA4P35542 130 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 TAF9Q16594 264 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 ZNF684Q5T5D7 378 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 HAGHLQ6PII5 290 aaPredicted RBP12.08□□□□□ -0.47
CBX3-203ENST00000409747 MOB3CQ70IA8 216 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 ZSCAN4Q8NAM6 433 aaPredicted RBP12.08□□□□□ -0.47
CBX3-203ENST00000409747 BCAS4Q8TDM0 211 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 TNFRSF14Q92956 283 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 DUS3LQ96G46 650 aaKnown RBP12.08□□□□□ -0.47
CBX3-203ENST00000409747 SDSLQ96GA7 329 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 KRT84Q9NSB2 600 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 ENOPH1Q9UHY7 261 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 ZNF222Q9UK12 451 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 POLDIP2Q9Y2S7 368 aa12.08□□□□□ -0.47
CBX3-203ENST00000409747 LOC110117498-PIK3R3F6TDL0 507 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 KCNAB3O43448 404 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 PRKYO43930 277 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 NRASP01111 189 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 TGFBR2P37173 567 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 DAPP51397 102 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 SRSF4Q08170 494 aaKnown RBP12.08□□□□□ -0.48
CBX3-203ENST00000409747 KLRD1Q13241 179 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 BCL2L15Q5TBC7 163 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 NXNL2Q5VZ03 156 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 MEPCEQ7L2J0 689 aaKnown RBP12.08□□□□□ -0.48
CBX3-203ENST00000409747 ZNF573Q86YE8 665 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 POC1AQ8NBT0 407 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 ZNRF1Q8ND25 227 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 OR5K1Q8NHB7 308 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 UTP4Q969X6 686 aaKnown RBP12.08□□□□□ -0.48
CBX3-203ENST00000409747 SLC7A6OSQ96CW6 309 aaPredicted RBP12.08□□□□□ -0.48
CBX3-203ENST00000409747 SEMA6AQ9H2E6 1030 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 MMP27Q9H306 513 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 C16orf95Q9H693 158 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.08□□□□□ -0.48
CBX3-203ENST00000409747 GTF2A1LQ9UNN4 478 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 COPS3Q9UNS2 423 aa12.08□□□□□ -0.48
CBX3-203ENST00000409747 SF3B6Q9Y3B4 125 aaKnown RBP12.08□□□□□ -0.48
CBX3-203ENST00000409747 H0YAE9 185 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 SLC1A7O00341 560 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 TFF1P04155 84 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 CAPZA1P52907 286 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 PROK1P58294 105 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 CXCR4P61073 352 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 MIDNQ504T8 468 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 CLVS2Q5SYC1 327 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 ZNF322Q6U7Q0 402 aaPredicted RBP12.07□□□□□ -0.48
CBX3-203ENST00000409747 GID4Q8IVV7 300 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 SLC35F2Q8IXU6 374 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 FAM185AQ8N0U4 392 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 ZNF561Q8N587 486 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 TTTY10Q9BZA0 68 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 FAM234AQ9H0X4 552 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 MAB21L2Q9Y586 359 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 R4GMQ9 66 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 CMYA5Q8N3K9 4069 aa12.07□□□□□ -0.48
CBX3-203ENST00000409747 A0A1W2PRD5 423 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 A0A1W2PRF3 423 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 A0A1W2PRM7 423 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 DHRS7CA6NNS2 312 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 PRR32B1ATL7 298 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 ZNF670-ZNF695F2Z2N8 137 aa12.06□□□□□ -0.48
CBX3-203ENST00000409747 J3QT63 122 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms