RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TMEM220Q6QAJ8 160 aa1.41□□□□□ -2.18
PMS1-203ENST00000409593 SSX9Q7RTT3 188 aa1.41□□□□□ -2.18
PMS1-203ENST00000409593 ITPRIPQ8IWB1 547 aa1.41□□□□□ -2.18
PMS1-203ENST00000409593 TMEM175Q9BSA9 504 aa1.41□□□□□ -2.18
PMS1-203ENST00000409593 MYEF2Q9P2K5 600 aaKnown RBP1.41□□□□□ -2.18
PMS1-203ENST00000409593 ACOT9Q9Y305 439 aa1.41□□□□□ -2.18
PMS1-203ENST00000409593 PPIL1Q9Y3C6 166 aa1.41□□□□□ -2.18
PMS1-203ENST00000409593 MYO9BQ13459 2157 aa1.4□□□□□ -2.19
PMS1-203ENST00000409593 LCA5LO95447 670 aa1.4□□□□□ -2.19
PMS1-203ENST00000409593 C2orf54Q08AI8 447 aa1.4□□□□□ -2.19
PMS1-203ENST00000409593 OR2M7Q8NG81 312 aa1.4□□□□□ -2.19
PMS1-203ENST00000409593 FXYD5Q96DB9 178 aa1.4□□□□□ -2.19
PMS1-203ENST00000409593 Q96MT0 163 aa1.4□□□□□ -2.19
PMS1-203ENST00000409593 NAPGQ99747 312 aaPredicted RBP1.4□□□□□ -2.19
PMS1-203ENST00000409593 ELP1O95163 1332 aa1.4□□□□□ -2.19
PMS1-203ENST00000409593 COL5A3P25940 1745 aaPredicted RBP1.4□□□□□ -2.19
PMS1-203ENST00000409593 IGKV1OR2-108A0A075B7D4 117 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 GGTLC3B5MD39 225 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 XRCC2O43543 280 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 CACNG3O60359 315 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 CDK1P06493 297 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 TRDNQ13061 729 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 TCF24Q7RTU0 167 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 REEP1Q9H902 201 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 BAZ1BQ9UIG0 1483 aaKnown RBP1.39□□□□□ -2.19
PMS1-203ENST00000409593 PRRC2BQ5JSZ5 2229 aaKnown RBP1.39□□□□□ -2.19
PMS1-203ENST00000409593 IGLL5B9A064 214 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 LINC01619G3V211 115 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 MPDU1O75352 247 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 ERLIN1O75477 346 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 UPK1BO75841 260 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 SNX4O95219 450 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 IGHV3-53P01767 116 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 GNRHRP30968 328 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 NUDT2P50583 147 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 RCN1Q15293 331 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 TMEM53Q6P2H8 277 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 FAM57AQ8TBR7 257 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 APH1AQ96BI3 265 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 JSRP1Q96MG2 331 aaPredicted RBP1.39□□□□□ -2.19
PMS1-203ENST00000409593 AGMATQ9BSE5 352 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 RDH14Q9HBH5 336 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 NMRK1Q9NWW6 199 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 ICOSQ9Y6W8 199 aa1.39□□□□□ -2.19
PMS1-203ENST00000409593 SPATA31E1Q6ZUB1 1445 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 MYBPHLA2RUH7 354 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 CATP04040 527 aaKnown RBP1.38□□□□□ -2.19
PMS1-203ENST00000409593 UBCP0CG48 685 aaKnown RBP1.38□□□□□ -2.19
PMS1-203ENST00000409593 HLA-GP17693 338 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 SLC6A1P30531 599 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 LGALS7P47929 136 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 NDUFAF7Q7L592 441 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 CPNE9Q8IYJ1 553 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 ZDHHC22Q8N966 263 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 ITFG1Q8TB96 612 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 OR5P3Q8WZ94 311 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 SLC25A44Q96H78 314 aaPredicted RBP1.38□□□□□ -2.19
PMS1-203ENST00000409593 PPP1R36Q96LQ0 422 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 HIGD2AQ9BW72 106 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 TRAPPC1Q9Y5R8 145 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 LTBP2Q14767 1821 aa1.38□□□□□ -2.19
PMS1-203ENST00000409593 ZNF608Q9ULD9 1512 aaPredicted RBP1.37□□□□□ -2.19
PMS1-203ENST00000409593 ICE1Q9Y2F5 2266 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 A0A075B6Q4 140 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 TRAV8-6A0A0B4J262 113 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 PSCAO43653 123 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 CDS2O95674 445 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 CSRP1P21291 193 aaKnown RBP1.37□□□□□ -2.19
PMS1-203ENST00000409593 ITIH4Q14624 930 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 RPEL1Q2QD12 228 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 APRG1Q8IVJ8 170 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 ZCCHC24Q8N2G6 241 aaKnown RBP1.37□□□□□ -2.19
PMS1-203ENST00000409593 PQLC3Q8N755 202 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 ORAOV1Q8WV07 137 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 ING5Q8WYH8 240 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 SMARCD1Q96GM5 515 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 RNF170Q96K19 258 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 UBE2E2Q96LR5 201 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 C20orf166-AS1Q96NR2 134 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 STMN4Q9H169 189 aaPredicted RBP1.37□□□□□ -2.19
PMS1-203ENST00000409593 ABCB9Q9NP78 766 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 TMEM38BQ9NVV0 291 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 MROH5Q6ZUA9 1318 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 JCADQ9P266 1359 aa1.37□□□□□ -2.19
PMS1-203ENST00000409593 A0A1W2PNM2 257 aa1.36□□□□□ -2.19
PMS1-203ENST00000409593 CTAG2O75638 210 aa1.36□□□□□ -2.19
PMS1-203ENST00000409593 SLC35G6P0C7Q6 338 aa1.36□□□□□ -2.19
PMS1-203ENST00000409593 GSTM3P21266 225 aa1.36□□□□□ -2.19
PMS1-203ENST00000409593 CFHR2P36980 270 aa1.36□□□□□ -2.19
PMS1-203ENST00000409593 CYB561A3Q8NBI2 242 aa1.36□□□□□ -2.19
PMS1-203ENST00000409593 CA5BP1Q8WTZ4 195 aa1.36□□□□□ -2.19
PMS1-203ENST00000409593 ARV1Q9H2C2 271 aa1.36□□□□□ -2.19
PMS1-203ENST00000409593 ELOVL6Q9H5J4 265 aa1.36□□□□□ -2.19
PMS1-203ENST00000409593 OR51B2Q9Y5P1 312 aa1.36□□□□□ -2.19
PMS1-203ENST00000409593 BRCA1P38398 1863 aaKnown RBP1.36□□□□□ -2.19
PMS1-203ENST00000409593 NPHP4O75161 1426 aaPredicted RBP1.36□□□□□ -2.19
PMS1-203ENST00000409593 INSRP06213 1382 aa1.36□□□□□ -2.19
PMS1-203ENST00000409593 TTC4O95801 387 aa1.35□□□□□ -2.19
PMS1-203ENST00000409593 TRGV3P03979 118 aa1.35□□□□□ -2.19
PMS1-203ENST00000409593 GFAPP14136 432 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms