RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 MFSD8Q8NHS3 518 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 ZFAND1Q8TCF1 268 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 THEM6Q8WUY1 208 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 TMEM186Q96B77 213 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 OR2M2Q96R28 347 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 ZNF587Q96SQ5 575 aaPredicted RBP10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 DYNLRB1Q9NP97 96 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 MCUBQ9NWR8 336 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 SLCO1C1Q9NYB5 712 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 TREM2Q9NZC2 230 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 OR5V1Q9UGF6 321 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 NAP1L6A6NFF2 107 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 ZNF593O00488 134 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 SLC16A7O60669 478 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 ECDO95905 644 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 HPXP02790 462 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 CBR1P16152 277 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 ADRA2CP18825 462 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 SRP9P49458 86 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 DAP3P51398 398 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 AP3S2P59780 193 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 TEX30Q5JUR7 227 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 BTN2A1Q7KYR7 527 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 ZNF679Q8IYX0 411 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 PRSS35Q8N3Z0 413 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 FAM169BQ8N8A8 192 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 FAM216AQ8WUB2 273 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 ORAI1Q96D31 301 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 HAVCR1Q96D42 359 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 S100A16Q96FQ6 103 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 MRPL37Q9BZE1 423 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 LINC00470Q9BZP3 86 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 GHITMQ9H3K2 345 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 LIN7BQ9HAP6 207 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 MRPL22Q9NWU5 206 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 KCNG2Q9UJ96 466 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 PCDHB10Q9UN67 800 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 FOXJ3Q9UPW0 622 aa10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 MRPS7Q9Y2R9 242 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-205ENST00000409542 ERCC1P07992 297 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 S100A1P23297 94 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 RCVRNP35243 200 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 GDNFP39905 211 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 MAGEB1P43366 347 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 SOX2P48431 317 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 HILS1P60008 231 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 PUDPQ08623 228 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 SNTB2Q13425 540 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 WDR38Q5JTN6 314 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 BCL2L15Q5TBC7 163 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 CD276Q5ZPR3 534 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 KCTD18Q6PI47 426 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 DNM1P34Q6PK57 102 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 MDP1Q86V88 176 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 LRP11Q86VZ4 500 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 MCHR2Q969V1 340 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 AMELYQ99218 206 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 MED28Q9H204 178 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 ELOVL3Q9HB03 270 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 NOX3Q9HBY0 568 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 EMC7Q9NPA0 242 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 CMYA5Q8N3K9 4069 aa10.82□□□□□ -0.68
CHRNA1-205ENST00000409542 LOC105371242A0A075B767 164 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 ANXA2P2A6NMY6 339 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 GPANK1O95872 356 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 HLA-DQA2P01906 255 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 ANXA2P07355 339 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 MSMBP08118 114 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 HOXB1P14653 301 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 CTLA4P16410 223 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 STOMP27105 288 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 ALDH3B1P43353 468 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 GPR6P46095 362 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 CLDN17P56750 224 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 LMO4P61968 165 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 MEP1BQ16820 701 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 RNASE12Q5GAN4 147 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 PHYHD1Q5SRE7 291 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 OLFML2AQ68BL7 652 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 H1FNTQ75WM6 255 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 IZUMO1Q8IYV9 350 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 SYNPRQ8TBG9 265 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 ZNF418Q8TF45 676 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 DEDD2Q8WXF8 326 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 ASB10Q8WXI3 467 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 MS4A3Q96HJ5 214 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 TMEM246Q9BRR3 403 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 GON7Q9BXV9 100 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 AUNIPQ9H7T9 357 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 CRLF2Q9HC73 371 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 GPR35Q9HC97 309 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 ESM1Q9NQ30 184 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 NUDT15Q9NV35 164 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 MYEF2Q9P2K5 600 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 STEAP1Q9UHE8 339 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 FBXO9Q9UK97 447 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 TRAV8-7A0A075B6U6 113 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 MS4A18H0YCH9 400 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 RPL36A-HNRNPH2H7BZ11 118 aa10.81□□□□□ -0.68
CHRNA1-205ENST00000409542 SPARCP09486 303 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms