RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 CHTOPQ9Y3Y2 248 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ACACAQ13085 2346 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 KNTC1P50748 2209 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 A0A1W2PN81 502 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 RBFOX3A6NFN3 312 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 CYB5BO43169 146 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 CTSVO60911 334 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 ERAL1O75616 437 aaKnown RBP9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 OPN1MWP04001 364 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 ZNF883P0CG24 379 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 OPN1MW2P0DN77 364 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 OPN1MW3P0DN78 364 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 PNLIPP16233 465 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 CHRNA7P36544 502 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 CDKN1BP46527 198 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 OR3A1P47881 315 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 TLE4Q04727 773 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 FAM189A2Q15884 450 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 CHRFAM7AQ494W8 412 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 ALG10BQ5I7T1 473 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 CYB5R2Q6BCY4 276 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 TMEM225Q6GV28 225 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 ABHD17CQ6PCB6 329 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 TMPPEQ6ZT21 453 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 NUP54Q7Z3B4 507 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 LHFPL1Q86WI0 220 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 TGIF2LYQ8IUE0 185 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 ZNF615Q8N8J6 731 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 SLC16A11Q8NCK7 471 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 OR10A7Q8NGE5 316 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 OR1P1Q8NH06 330 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 MFSD8Q8NHS3 518 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 FAM46BQ96A09 425 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 SYT3Q9BQG1 590 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 SCNM1Q9BWG6 230 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 OR11A1Q9GZK7 315 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 C5orf66Q9H5L9 145 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 SRD5A3Q9H8P0 318 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 MKKSQ9NPJ1 570 aaPredicted RBP9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 CD84Q9UIB8 345 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 FOXD3Q9UJU5 478 aaPredicted RBP9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 SRPK3Q9UPE1 567 aa9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 PUS1Q9Y606 427 aaKnown RBP eCLIP9.41□□□□□ -0.9
NIF3L1-204ENST00000409357 COL5A1P20908 1838 aaPredicted RBP9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 A0A087WV62 115 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 A0A1B0GWA3 101 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 E5RGE8 158 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 CLDN34H7C241 214 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 MASP2O00187 686 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 GSTP1P09211 210 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 FTH1P19P0C7X4 201 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 SUPT4H1P63272 117 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 CSNK1G2P78368 415 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 TSTA3Q13630 321 aaPredicted RBP9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 ELOA3BQ3SY89 546 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 ZNF506Q5JVG8 444 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 ULK3Q6PHR2 472 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 TRAPPC6BQ86SZ2 158 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 CATSPERDQ86XM0 798 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 ELOA3Q8NG57 546 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 OR13H1Q8NG92 308 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 OR51F2Q8NH61 342 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 SAP25Q8TEE9 199 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 HOXB13Q92826 284 aaPredicted RBP9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 OR10C1Q96KK4 312 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 ATG101Q9BSB4 218 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 OSGIN2Q9Y236 505 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 NSG2Q9Y328 171 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 RHBDD3Q9Y3P4 386 aa9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 YLPM1P49750 1951 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-204ENST00000409357 ASXL3Q9C0F0 2248 aa9.4□□□□□ -0.91
NIF3L1-204ENST00000409357 IGLON5A6NGN9 336 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 C1QTNF9BB2RNN3 333 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 PRICKLE3O43900 615 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 GPR137BO60478 399 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 RAMP1O60894 148 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ELFN1P0C7U0 828 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 C1QTNF9P0C862 333 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 EPHA8P29322 1005 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 HRH1P35367 487 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 GABRA4P48169 554 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ROM1Q03395 351 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 EIF2B1Q14232 305 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 HERPUD1Q15011 391 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ASPHD2Q6ICH7 369 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ZNF774Q6NX45 483 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 DPPA3Q6W0C5 159 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ZNF679Q8IYX0 411 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 JAGN1Q8N5M9 183 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 SLC35G3Q8N808 338 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 APCDD1LQ8NCL9 501 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 SLC24A4Q8NFF2 622 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 OR4S1Q8NGB4 309 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 OR6K6Q8NGW6 343 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 MARCH1Q8TCQ1 289 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 EMG1Q92979 244 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 TMEM18Q96B42 140 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 NMNAT3Q96T66 252 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 ZPBPQ9BS86 351 aa9.39□□□□□ -0.91
NIF3L1-204ENST00000409357 NIPSNAP3BQ9BS92 247 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms