RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 THRAP10827 490 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 CD1EP15812 388 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 TCP1P17987 556 aaKnown RBP3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 GABRG2P18507 467 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 RCC1P18754 421 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 RAB3BP20337 219 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 OMGP23515 440 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 RPL14P50914 215 aaKnown RBP3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 CRISP3P54108 245 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 TAS2R39P59534 338 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 GNG2P59768 71 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 MRPS25P82663 173 aaKnown RBP3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 PITPNAQ00169 270 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 PRPSAP1Q14558 356 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 PSG5Q15238 335 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 QPRTQ15274 297 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 TRIP13Q15645 432 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 PTPN20Q4JDL3 420 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 HACD4Q5VWC8 232 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 LRRN1Q6UXK5 716 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 C12orf54Q6X4T0 127 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 LYG2Q86SG7 212 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 SETD3Q86TU7 594 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 FAM71E2Q8N5Q1 922 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 C2orf73Q8N5S3 287 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 C12orf29Q8N999 325 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 DCAF4L2Q8NA75 395 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 MDS2Q8NDY4 140 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR10AD1Q8NGE0 317 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR9A2Q8NGT5 310 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 CCDC124Q96CT7 223 aaKnown RBP3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 GPR21Q99679 349 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 MAP1LC3CQ9BXW4 147 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 BEX2Q9BXY8 128 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 YTHDF1Q9BYJ9 559 aaKnown RBP3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 SPNS1Q9H2V7 528 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 TRABDQ9H4I3 376 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 IL17CQ9P0M4 197 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 PCYOX1Q9UHG3 505 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 OPN4Q9UHM6 478 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 PSG8Q9UQ74 426 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 PRELID3BQ9Y3B1 194 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 MROH7Q68CQ1 1323 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 RNASEK-C17orf49H0YIS7 233 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 GABRPO00591 440 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 KRT75O95678 551 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 IGLV1-47P01700 117 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 IGHV4-34P06331 123 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 LINC00614P0C842 121 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 PGA5P0DJD9 388 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 UGT2B10P36537 528 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 TALDO1P37837 337 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 IDH2P48735 452 aaKnown RBP3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 ELF3P78545 371 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 HMGCS1Q01581 520 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 TOMM34Q15785 309 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 TNXAQ16473 311 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 POU2AF1Q16633 256 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 GUK1Q16774 197 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 NDUFAF6Q330K2 333 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 COX19Q49B96 90 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 GCSAMLQ5JQS6 135 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 RWDD4Q6NW29 188 aaKnown RBP3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 UNC93AQ86WB7 457 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 CDRT4Q8N9R6 151 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 C11orf72Q8NBR9 251 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 CHST4Q8NCG5 386 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 DUSP18Q8NEJ0 188 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 CCDC54Q8NEL0 328 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 NOXO1Q8NFA2 376 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR5B17Q8NGF7 314 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR51E1Q8TCB6 317 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR8D1Q8WZ84 308 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 S100PBPQ96BU1 408 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 DYNLL2Q96FJ2 89 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNF285Q96NJ3 590 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 NRTNQ99748 197 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNF251Q9BRH9 671 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 TIPINQ9BVW5 301 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNF717Q9BY31 904 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 VCX3AQ9NNX9 186 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 FBXO8Q9NRD0 319 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 SMPXQ9UHP9 88 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNF225Q9UK10 706 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 PRG3Q9Y2Y8 225 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 NUBP2Q9Y5Y2 271 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 LTBP1Q14766 1721 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 NID2Q14112 1375 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 RTL9Q8NET4 1388 aa3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 AQRO60306 1485 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB1P13-201ENST00000406019 PIKFYVEQ9Y2I7 2098 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 WDR97A6NE52 1622 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 IGLV3-10A0A075B6K4 115 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 H7C1H1 209 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 TXNDC9O14530 226 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 RFXANKO14593 260 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 PFDN6O15212 129 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 ACOX3O15254 700 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 SC5DO75845 299 aa3.34□□□□□ -1.87
HMGB1P13-201ENST00000406019 IFNA5P01569 189 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms