RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 HSPD1P10809 573 aaKnown RBP2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 NQO2P16083 231 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 PRLHRP49683 370 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 TAS2R39P59534 338 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 TAS2R60P59551 318 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 RPL31P62899 125 aaKnown RBP2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 TPM4P67936 248 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 SLC35A1P78382 337 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 ZNF816Q0VGE8 651 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 NAB1Q13506 487 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 TNXAQ16473 311 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 YIF1BQ5BJH7 314 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 CPTPQ5TA50 214 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 IGFL3Q6UXB1 125 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 ZNF101Q8IZC7 436 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 ZCCHC24Q8N2G6 241 aaKnown RBP2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 LINC00469Q8N7U9 141 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR6K2Q8NGY2 324 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 DOK1Q99704 481 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 C20orf144Q9BQM9 153 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 RSPO3Q9BXY4 272 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 NDEL1Q9GZM8 345 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 TOLLIPQ9H0E2 274 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR51B5Q9H339 312 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 EXOSC4Q9NPD3 245 aaKnown RBP2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 HEBP1Q9NRV9 189 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 NRBP2Q9NSY0 501 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 TAS2R5Q9NYW4 299 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 STX18Q9P2W9 335 aaKnown RBP2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 CLEC2DQ9UHP7 191 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 POFUT2Q9Y2G5 429 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 C15orf41Q9Y2V0 281 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 PTPRTO14522 1441 aa2.22□□□□□ -2.05
HMGB1P17-201ENST00000403495 TRAV8-7A0A075B6U6 113 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 TRPC5OSA6NMA1 111 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 RPL36A-HNRNPH2H7BZ11 118 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 H7C2Y5 167 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 TAAR5O14804 337 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 BET1O15155 118 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 ENSAO43768 121 aaKnown RBP2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 PLIN3O60664 434 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 CCDC22O60826 627 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 TTC4O95801 387 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 CD74P04233 296 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 IL4P05112 153 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 TPM3P06753 285 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 LIPCP11150 499 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 CXCR1P25024 350 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 PAX6P26367 422 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 GNRHRP30968 328 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 HTR2BP41595 481 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 DNASE1L1P49184 302 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 ELF3P78545 371 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 ZNF616Q08AN1 781 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 ST3GAL4Q11206 333 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 COTL1Q14019 142 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 TAL2Q16559 108 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 ZNF470Q6ECI4 717 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 APOBEC3HQ6NTF7 200 aaKnown RBP2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 GUSBP11Q6P575 273 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 ERO1BQ86YB8 467 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 FAM9CQ8IZT9 166 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 C17orf78Q8N4C9 275 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 LRRC52Q8N7C0 313 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 OR1L1Q8NH94 360 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 SUN5Q8TC36 379 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 TMEM239Q8WW34 195 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 CPB2Q96IY4 423 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 ZFP3Q96NJ6 502 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 ALS2CR12Q96Q35 445 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 COPS4Q9BT78 406 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 CA10Q9NS85 328 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 TREX1Q9NSU2 369 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 MRM2Q9UI43 246 aaKnown RBP2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 ENPP5Q9UJA9 477 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 CBY1Q9Y3M2 126 aa2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 ZNF608Q9ULD9 1512 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P17-201ENST00000403495 TRAV8-6A0A0B4J262 113 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 CENPVL3A0A0U1RRI6 287 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 ANKRD20A5PA0PJZ0 165 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 GOLGA8JA6NMD2 632 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 BTNL10A8MVZ5 291 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 J3QT63 122 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 LGALS9O00182 355 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 NDUFS6O75380 124 aaKnown RBP2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 DHRS3O75911 302 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 CYB5R3P00387 301 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 GOLGA8HP0CJ92 632 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 IL1RNP18510 177 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 RANBP1P43487 201 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 MLF1P58340 268 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 MTPNP58546 118 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 VSNL1P62760 191 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 TRDNQ13061 729 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 MAD2L1BPQ15013 274 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 LUZP6Q538Z0 58 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 FAM27D1Q5T7N8 215 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 CLEC6AQ6EIG7 209 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 FAHD1Q6P587 224 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms