RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 HOXB1P14653 301 aaPredicted RBP17.4■□□□□ 0.38
CCDC47-202ENST00000403162 NFYBP25208 207 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 TMEM268Q5VZI3 342 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 OR6X1Q8NH79 312 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 POC1BQ8TC44 478 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 PARP11Q9NR21 331 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 GSKIPQ9P0R6 139 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 PPP4R1LQ9P1A2 415 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 SERPINE3A8MV23 424 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 CST4P01036 141 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 IFNA4P05014 189 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 HOXB5P09067 269 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 PAX6P26367 422 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 FOXL2P58012 376 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 GRB2P62993 217 aaKnown RBP17.39■□□□□ 0.37
CCDC47-202ENST00000403162 ACY1Q03154 408 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 ECH1Q13011 328 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 CRIP3Q6Q6R5 217 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 FAM57BQ71RH2 274 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 ANKRD37Q7Z713 158 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 STT3BQ8TCJ2 826 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 CPNE2Q96FN4 548 aaPredicted RBP17.39■□□□□ 0.37
CCDC47-202ENST00000403162 OR5B2Q96R09 309 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 CNTNAP3Q9BZ76 1288 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 C1orf123Q9NWV4 160 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 IGLV3-32A0A0A0MS00 114 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 CA11O75493 328 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 IFNA2P01563 188 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 GAPDHP04406 335 aaKnown RBP17.39■□□□□ 0.37
CCDC47-202ENST00000403162 HPNP05981 417 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 NAT2P11245 290 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 FOLR2P14207 255 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 ZNF708P17019 499 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 ADH6P28332 368 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 ECI1P42126 302 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 PTGFRP43088 359 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 ZFP36L1Q07352 338 aaKnown RBP17.39■□□□□ 0.37
CCDC47-202ENST00000403162 KISS1Q15726 138 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 HIST3H3Q16695 136 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 ZNF283Q8N7M2 679 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 OR6C1Q96RD1 312 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 PECRQ9BY49 303 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 IFT22Q9H7X7 185 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 RNF122Q9H9V4 155 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 KLRF1Q9NZS2 232 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 LHX6Q9UPM6 363 aa17.39■□□□□ 0.37
CCDC47-202ENST00000403162 C14orf166Q9Y224 244 aaKnown RBP17.39■□□□□ 0.37
CCDC47-202ENST00000403162 EP300Q09472 2414 aaPredicted RBP17.38■□□□□ 0.37
CCDC47-202ENST00000403162 ADAMTS20P59510 1910 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 FBXO24O75426 580 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 PTGER4P35408 488 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 S100A12P80511 92 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 TRA2AQ13595 282 aaKnown RBP eCLIP17.38■□□□□ 0.373e-9■□□□□ 10.9
CCDC47-202ENST00000403162 CMSS1Q9BQ75 279 aaKnown RBP17.38■□□□□ 0.37
CCDC47-202ENST00000403162 TM2D1Q9BX74 207 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 FBXO9Q9UK97 447 aaPredicted RBP17.38■□□□□ 0.37
CCDC47-202ENST00000403162 PCDHGA1Q9Y5H4 931 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 FAM157AC9JC47 383 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 PROB1E7EW31 1015 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 IGLV3-1P01715 115 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 SFTPBP07988 381 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 RCC1P18754 421 aaPredicted RBP17.38■□□□□ 0.37
CCDC47-202ENST00000403162 NME2P22392 152 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 CTSSP25774 331 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 BLVRBP30043 206 aaPredicted RBP17.38■□□□□ 0.37
CCDC47-202ENST00000403162 F2RL1P55085 397 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 RBM39Q14498 530 aaKnown RBP17.38■□□□□ 0.37
CCDC47-202ENST00000403162 ARL6IP1Q15041 203 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 PEA15Q15121 130 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 PPA1Q15181 289 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 CHRFAM7AQ494W8 412 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 CARD17Q5XLA6 110 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 RTL6Q6ICC9 239 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 FAM219AQ8IW50 185 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 ATPIF1Q9UII2 106 aa17.38■□□□□ 0.37
CCDC47-202ENST00000403162 IGLV3-12A0A075B6K2 115 aa17.37■□□□□ 0.37
CCDC47-202ENST00000403162 COLCA2A8K830 154 aa17.37■□□□□ 0.37
CCDC47-202ENST00000403162 SERPINA5P05154 406 aa17.37■□□□□ 0.37
CCDC47-202ENST00000403162 RBMXP38159 391 aaKnown RBP17.37■□□□□ 0.37
CCDC47-202ENST00000403162 SLC16A14Q7RTX9 510 aa17.37■□□□□ 0.37
CCDC47-202ENST00000403162 C1QL2Q7Z5L3 287 aa17.37■□□□□ 0.37
CCDC47-202ENST00000403162 PIP4P1Q86T03 277 aa17.37■□□□□ 0.37
CCDC47-202ENST00000403162 OXGR1Q96P68 337 aa17.37■□□□□ 0.37
CCDC47-202ENST00000403162 MESP1Q9BRJ9 268 aa17.37■□□□□ 0.37
CCDC47-202ENST00000403162 OCIAD1Q9NX40 245 aa17.37■□□□□ 0.37
CCDC47-202ENST00000403162 RRP8O43159 456 aaKnown RBP17.36■□□□□ 0.37
CCDC47-202ENST00000403162 JTBO76095 146 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 QDPRP09417 244 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 RPL12P30050 165 aaKnown RBP17.36■□□□□ 0.37
CCDC47-202ENST00000403162 THBS4P35443 961 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 PTGDSP41222 190 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 KCNJ3P48549 501 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 MEOX2P50222 304 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 DVL1P1P54792 670 aaPredicted RBP17.36■□□□□ 0.37
CCDC47-202ENST00000403162 TRIP6Q15654 476 aaKnown RBP17.36■□□□□ 0.37
CCDC47-202ENST00000403162 ZNF239Q16600 458 aaKnown RBP17.36■□□□□ 0.37
CCDC47-202ENST00000403162 IAH1Q2TAA2 248 aaPredicted RBP17.36■□□□□ 0.37
CCDC47-202ENST00000403162 ASCL5Q7RTU5 278 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 AGBL5Q8NDL9 886 aa17.36■□□□□ 0.37
CCDC47-202ENST00000403162 LYPD6BQ8NI32 183 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms