RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 BOLA1Q9Y3E2 137 aa10.59□□□□□ -0.71
CLIP4-203ENST00000401617 INTS1Q8N201 2190 aaKnown RBP10.59□□□□□ -0.71
CLIP4-203ENST00000401617 SERPINE3A8MV23 424 aa10.59□□□□□ -0.71
CLIP4-203ENST00000401617 ZNF780AO75290 641 aaPredicted RBP10.59□□□□□ -0.71
CLIP4-203ENST00000401617 CST4P01036 141 aa10.59□□□□□ -0.71
CLIP4-203ENST00000401617 MALLQ13021 153 aa10.59□□□□□ -0.71
CLIP4-203ENST00000401617 PDZK1IP1Q13113 114 aa10.59□□□□□ -0.71
CLIP4-203ENST00000401617 MOB3CQ70IA8 216 aa10.59□□□□□ -0.71
CLIP4-203ENST00000401617 CCDC36Q8IYA8 594 aa10.59□□□□□ -0.71
CLIP4-203ENST00000401617 OR56B2PQ8NGI1 322 aa10.59□□□□□ -0.71
CLIP4-203ENST00000401617 PIGCQ92535 297 aa10.59□□□□□ -0.71
CLIP4-203ENST00000401617 WBP1Q96G27 269 aa10.59□□□□□ -0.71
CLIP4-203ENST00000401617 CYYR1Q96J86 154 aa10.59□□□□□ -0.71
CLIP4-203ENST00000401617 PLSCR3Q9NRY6 295 aa10.59□□□□□ -0.71
CLIP4-203ENST00000401617 IGKV1-12A0A0C4DH73 117 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 TMEM82A0PJX8 343 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 AHRRA9YTQ3 701 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 KLK10O43240 276 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 AKR7A2O43488 359 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 ANGPTL7O43827 346 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 OR2A4O95047 310 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 NGFP01138 241 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 IGKV1D-12P01611 117 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 RLN1P04808 185 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 CCNOP22674 350 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 IGHV1-2P23083 117 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 HRH1P35367 487 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 WNT5AP41221 380 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 KIR2DL2P43627 348 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-203ENST00000401617 CXADRP78310 365 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 RSU1Q15404 277 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 SF3B4Q15427 424 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLIP4-203ENST00000401617 ACTBL2Q562R1 376 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 VAX1Q5SQQ9 334 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 ATPAF1Q5TC12 328 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-203ENST00000401617 PLCXD3Q63HM9 321 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 SIGIRRQ6IA17 410 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 MDP1Q86V88 176 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 ZSCAN4Q8NAM6 433 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-203ENST00000401617 Q8NFD4 153 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 OR52B4Q8NGK2 314 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 FBXW5Q969U6 566 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 MRPS24Q96EL2 167 aaKnown RBP10.58□□□□□ -0.72
CLIP4-203ENST00000401617 POM121Q96HA1 1249 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 OR2A7Q96R45 310 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 PIPOXQ9P0Z9 390 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 ZNF69Q9UC07 566 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 HSF4Q9ULV5 492 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 SVILO95425 2214 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 AKAP13Q12802 2813 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 PQLC2LA1A4F0 135 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 FIGNL2A6NMB9 653 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 G3V3Q6 166 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 ZNHIT1O43257 154 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 SPRY1O43609 319 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-203ENST00000401617 HOXB1P14653 301 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-203ENST00000401617 APLNRP35414 380 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 ACSF3Q4G176 576 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-203ENST00000401617 RTL6Q6ICC9 239 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 Q6ZT83 130 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 NLRC3Q7RTR2 1065 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 CD163Q86VB7 1156 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 HOGA1Q86XE5 327 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 ZDHHC22Q8N966 263 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 C9orf106Q8NAJ2 232 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 CSNK2A3Q8NEV1 391 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 OR4K15Q8NH41 348 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 CCDC107Q8WV48 283 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 POFUT1Q9H488 388 aa10.58□□□□□ -0.72
CLIP4-203ENST00000401617 ELL3Q9HB65 397 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-203ENST00000401617 ZNF850A8MQ14 1090 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 J3QW42 95 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 HTR3BO95264 441 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 ZNF14P17017 642 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-203ENST00000401617 EIF2S3P41091 472 aaKnown RBP10.57□□□□□ -0.72
CLIP4-203ENST00000401617 TGFBR3Q03167 851 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 MICBQ29980 383 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 RPUSD3Q6P087 351 aaKnown RBP10.57□□□□□ -0.72
CLIP4-203ENST00000401617 MRPL21Q7Z2W9 205 aaKnown RBP10.57□□□□□ -0.72
CLIP4-203ENST00000401617 GCNT2Q8N0V5 402 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 MUC20Q8N307 709 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-203ENST00000401617 C9orf62Q8N4C0 152 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 OR5M9Q8NGP3 310 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 TMEM246Q9BRR3 403 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 FGF23Q9GZV9 251 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-203ENST00000401617 CRIM1Q9NZV1 1036 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 MGAT4CQ9UBM8 478 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 EIF3KQ9UBQ5 218 aaKnown RBP10.57□□□□□ -0.72
CLIP4-203ENST00000401617 DKK4Q9UBT3 224 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 VSIG4Q9Y279 399 aa10.57□□□□□ -0.72
CLIP4-203ENST00000401617 CEACAM18A8MTB9 384 aa10.56□□□□□ -0.72
CLIP4-203ENST00000401617 CSTBP04080 98 aaKnown RBP10.56□□□□□ -0.72
CLIP4-203ENST00000401617 PDGFAP04085 211 aa10.56□□□□□ -0.72
CLIP4-203ENST00000401617 GIPP09681 153 aaPredicted RBP10.56□□□□□ -0.72
CLIP4-203ENST00000401617 COX5AP20674 150 aa10.56□□□□□ -0.72
CLIP4-203ENST00000401617 PRDX4Q13162 271 aa10.56□□□□□ -0.72
CLIP4-203ENST00000401617 ARFRP1Q13795 201 aa10.56□□□□□ -0.72
CLIP4-203ENST00000401617 HLXQ14774 488 aaPredicted RBP10.56□□□□□ -0.72
CLIP4-203ENST00000401617 GABRA6Q16445 453 aa10.56□□□□□ -0.72
CLIP4-203ENST00000401617 NKPD1Q17RQ9 610 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms