RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CBLCQ9ULV8 474 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 CNTFRP26992 372 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 TMEM38AQ9H6F2 299 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 IQSEC2Q5JU85 1478 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 SIRPB1O00241 398 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 ALOX5APP20292 161 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 ID4P47928 161 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 RPS26P62854 115 aaKnown RBP7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 C22orf39Q6P5X5 142 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 GLIPR1L1Q6UWM5 242 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 OPALINQ96PE5 141 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF2Q9BSG1 426 aaPredicted RBP7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 DCAF13Q9NV06 445 aaKnown RBP7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 C1RLQ9NZP8 487 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 F7P08709 466 aaPredicted RBP7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 HLA-GP17693 338 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 OR10AC1Q8NH08 325 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 HSD17B10Q99714 261 aaKnown RBP7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 PGPEP1LA6NFU8 196 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 COCHO43405 550 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 CYB561A3Q8NBI2 242 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 NETO1Q8TDF5 533 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 IGSF8Q969P0 613 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 MEGF10Q96KG7 1140 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 MS4A7Q9GZW8 240 aaPredicted RBP7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 KLRC4O43908 158 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 EDN1P05305 212 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 SUMO2P61956 95 aaKnown RBP7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 SLC25A46Q96AG3 418 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 F8WEM9 126 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 MAFAQ8NHW3 353 aaPredicted RBP7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 DUSP13Q9UII6 198 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 USP22Q9UPT9 525 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 VDAC3Q9Y277 283 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 KIR2DS3Q14952 304 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 SLC25A43Q8WUT9 341 aaPredicted RBP7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 TMIGD2Q96BF3 282 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 NRIP2Q9BQI9 281 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 PTPRUQ92729 1446 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 ACHEP22303 614 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 NRLP54845 237 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 ALKBH1Q13686 389 aaKnown RBP7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 RIPPLY2Q5TAB7 128 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 CLEC18BQ6UXF7 455 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 ANKRD33Q7Z3H0 272 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 FAM219AQ8IW50 185 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 HSD17B8Q92506 261 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 CD14P08571 375 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 KREMEN2Q8NCW0 462 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF680Q8NEM1 530 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 TMEM50AO95807 157 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 BTG2P78543 158 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 OR1B1Q8NGR6 318 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 FAM174AQ8TBP5 190 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 MRPL30Q8TCC3 161 aaKnown RBP7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 H7C1H1 209 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 FOLR2P14207 255 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 GAGE2BQ13066 116 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 PCLAFQ15004 111 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 GAGE2EQ4V326 116 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 EMC4Q5J8M3 183 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 DCAF4L2Q8NA75 395 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 GAGE2DQ9UEU5 116 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 APOBEC3BQ9UH17 382 aaKnown RBP7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 VSIG4Q9Y279 399 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 RER1O15258 196 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 LAX1Q8IWV1 398 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 GBF1Q92538 1859 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 PDCD2LQ9BRP1 358 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 JCADQ9P266 1359 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 HIST1H1DP16402 221 aaKnown RBP7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 GHSRQ92847 366 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 C12orf42Q96LP6 360 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 FOXO6A8MYZ6 492 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 S1PR2O95136 353 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF865P0CJ78 1059 aaPredicted RBP7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 XKR7Q5GH72 579 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 WDFY1Q8IWB7 410 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 WDR83Q9BRX9 315 aaKnown RBP7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 SMOC2Q9H3U7 446 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 PLSCR4Q9NRQ2 329 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 KCNE5Q9UJ90 142 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 AKAP12Q02952 1782 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 STPG3Q8N7X2 389 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 OR2V2Q96R30 315 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 WDR62O43379 1518 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 TRAV8-4A0A0B4J246 113 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 GRPP07492 148 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 EPHA8P29322 1005 aaPredicted RBP7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 CD52P31358 61 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 JAM2P57087 298 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 FAM171A2A8MVW0 826 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 C11orf94C9JXX5 98 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 HIST1H1AQ02539 215 aaPredicted RBP7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 MS4A13Q5J8X5 152 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 ORAOV1Q8WV07 137 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 FBXL18Q96ME1 805 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 YAE1D1Q9NRH1 226 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 CLDN16Q9Y5I7 305 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 EFCAB6Q5THR3 1501 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms