RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 CCL13Q99616 98 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ADI1Q9BV57 179 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 PLEKHA1Q9HB21 404 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 TRIM36Q9NQ86 728 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 MRPS18AQ9NVS2 196 aaKnown RBP11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 METRNQ9UJH8 293 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 DOCK11Q5JSL3 2073 aa11.72□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OR5B21A6NL26 309 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 C22orf46C9J442 243 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 NDUFA2O43678 99 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 HTR1AP08908 422 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 UBCP0CG48 685 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 MUC1P15941 1255 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 CPT2P23786 658 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 HAAOP46952 286 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 KLHL22Q53GT1 634 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 FDX2Q6P4F2 183 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OR10Z1Q8NGY1 313 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 OR10AC1Q8NH08 325 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 TRMT10AQ8TBZ6 339 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 NPRL2Q8WTW4 380 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 RAB40AQ8WXH6 277 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 AQP3Q92482 292 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 ERVK-18Q9QC07 812 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 AUP1Q9Y679 476 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 COL6A5A8TX70 2615 aa11.71□□□□□ -0.53
HLA-DQB1-202ENST00000399079 IGHV2-70DA0A0C4DH43 119 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 PQLC2LA1A4F0 135 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ANKRD61A6NGH8 418 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 E9PI62 339 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 DVL1O14640 695 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 RGS9O75916 674 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 LIMS3P0CW19 117 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 LIMS4P0CW20 117 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 AMY2BP19961 511 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 PAX8Q06710 450 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 UBE2V2Q15819 145 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 C1QL2Q7Z5L3 287 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 FAM216BQ8N7L0 139 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 OR51A4Q8NGJ6 313 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 NRG4Q8WWG1 115 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ZNF488Q96MN9 340 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 OCEL1Q9H607 264 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 DNAJB11Q9UBS4 358 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 OR4C45A6NMZ5 311 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 SYNGR1O43759 233 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 RRP9O43818 475 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 SELLP14151 372 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 GLRA1P23415 457 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 CAPGP40121 348 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 NPY4RP50391 375 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ETV1P50549 477 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 SLC34A1Q06495 639 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ALKBH1Q13686 389 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 TMEM244Q5VVB8 128 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 STUMQ69YW2 141 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ANGPTL5Q86XS5 388 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 CALHM1Q8IU99 346 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 BATF2Q8N1L9 274 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 SYS1Q8N2H4 156 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 SETD9Q8NE22 299 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 NANPQ8TBE9 248 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 C22orf15Q8WYQ4 148 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 C12orf43Q96C57 262 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ADAT3Q96EY9 351 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 NUDT16L1Q9BRJ7 211 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 CHST5Q9GZS9 411 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 FGF20Q9NP95 211 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 INPP5EQ9NRR6 644 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 KAAG1Q9UBP8 84 aa11.7□□□□□ -0.54
HLA-DQB1-202ENST00000399079 IGKV1-27A0A075B6S5 117 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 KIR2DS1A0A191URI9 304 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 FAM230AA0A1W2PPH8 454 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 H0YAE9 185 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 FSHBP01225 129 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ISG15P05161 165 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 EPHA1P21709 976 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 DCKP27707 260 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 CCR9P51686 369 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 GTF2A1P52655 376 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 IKZF1Q13422 519 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 KLF17Q5JT82 389 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 LAIR2Q6ISS4 152 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 BTNL3Q6UXE8 466 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ZNF573Q86YE8 665 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ANGPTL6Q8NI99 470 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ZNF671Q8TAW3 534 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ST8SIA4Q92187 359 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 FGGYQ96C11 551 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 MRPL48Q96GC5 212 aaKnown RBP11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 MRI1Q9BV20 369 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 NLKQ9UBE8 527 aa11.69□□□□□ -0.54
HLA-DQB1-202ENST00000399079 IGHV3OR16-10A0A075B7F0 116 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 OR2AT4A6NND4 320 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ZFPL1O95159 310 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 IL18R1Q13478 541 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 OR2G6Q5TZ20 316 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 XAF1Q6GPH4 301 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 BTN2A1Q7KYR7 527 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 SLC36A1Q7Z2H8 476 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms