RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 LIN37Q96GY3 246 aaPredicted RBP8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF2Q9BSG1 426 aaPredicted RBP8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 PARP11Q9NR21 331 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 PARPBPQ9NWS1 579 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 DOK5Q9P104 306 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 CEP290O15078 2479 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 JTBO76095 146 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 IFNA21P01568 189 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 CTSEP14091 401 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 FSTP19883 344 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 RRADP55042 308 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 TOMM20Q15388 145 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 SGCBQ16585 318 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 TMEM196Q5HYL7 178 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 LCE2AQ5TA79 106 aaPredicted RBP8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 GGNBP1Q5YKI7 109 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 CYB5R2Q6BCY4 276 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 SPNS3Q6ZMD2 512 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 DTWD2Q8NBA8 298 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 SUMF2Q8NBJ7 301 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 C11orf40Q8WZ69 217 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 GAR1Q9NY12 217 aaKnown RBP8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 B3GALT5Q9Y2C3 310 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 IGKV1D-8A0A087WSZ0 117 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF729A6NN14 1252 aaPredicted RBP8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 FAM157AC9JC47 383 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 PLRG1O43660 514 aaKnown RBP8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 GATCO43716 136 aaKnown RBP8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 FOSL1P15407 271 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 CRABP1P29762 137 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 TAGLN2P37802 199 aaKnown RBP8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 SLC6A9P48067 706 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 NOVA1P51513 510 aaKnown RBP8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 PLCXD2Q0VAA5 305 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 RSU1Q15404 277 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 AADACL3Q5VUY0 350 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 NSUN5P2Q63ZY6 315 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 ZFP62Q8NB50 900 aaPredicted RBP8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 UBAC2Q8NBM4 344 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 CCDC54Q8NEL0 328 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 OR1J1Q8NGS3 322 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 EGLN1Q9GZT9 426 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 NELFAQ9H3P2 528 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 GPR84Q9NQS5 396 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 C19orf12Q9NSK7 152 aa8.71□□□□□ -1.02
PTCHD4-202ENST00000398738 ASXL3Q9C0F0 2248 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 IGHV3-20A0A0C4DH32 117 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 PLPP3O14495 311 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 CDC14BO60729 498 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 QDPRP09417 244 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 HNRNPA1P09651 372 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 FABP4P15090 132 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 GABRA4P48169 554 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 CSNK1EP49674 416 aaKnown RBP8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 RPS23P62266 143 aaKnown RBP8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 CCL20P78556 96 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 TLE1Q04724 770 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 GAMTQ14353 236 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 LHFPL2Q6ZUX7 228 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 FAM57BQ71RH2 274 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 C6orf201Q7Z4U5 140 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 C20orf196Q8IYI0 205 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 ZNF519Q8TB69 540 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 DAZLQ92904 295 aaKnown RBP8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 DUSP15Q9H1R2 295 aaPredicted RBP8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 WFDC1Q9HC57 220 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 LUZP4Q9P127 313 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 NXT1Q9UKK6 140 aaKnown RBP8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 IFITM10A6NMD0 228 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 H0YL77 283 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 TMPRSS2O15393 492 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 PGCP20142 388 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 FPR2P25090 351 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 HTR5AP47898 357 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 BIDP55957 195 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 TLE3Q04726 772 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 FUT7Q11130 342 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 PDCD1Q15116 288 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 SURF2Q15527 256 aaPredicted RBP8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 TMEM268Q5VZI3 342 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 MEX3BQ6ZN04 569 aaKnown RBP8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 OR56B1Q8NGI3 324 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 NOSIPQ9Y314 301 aaKnown RBP8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 CLDN16Q9Y5I7 305 aa8.7□□□□□ -1.02
PTCHD4-202ENST00000398738 STMND1H3BQB6 276 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 RER1O15258 196 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 CYB5BO43169 146 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 PPIHO43447 177 aaKnown RBP8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 KLF8O95600 359 aaPredicted RBP8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 CCL5P13501 91 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 NDUFB7P17568 137 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 SLC26A5P58743 744 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 UBE2KP61086 200 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 QRFPP83859 136 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 MFAP5Q13361 173 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 OGFOD3Q6PK18 319 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 Q7L0L9 218 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 NUP54Q7Z3B4 507 aa8.69□□□□□ -1.02
PTCHD4-202ENST00000398738 LYZL2Q7Z4W2 148 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms