RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SIGIRRQ6IA17 410 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 SLC23A3Q6PIS1 610 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 CLEC14AQ86T13 490 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 OSTM1Q86WC4 334 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 ETFBKMTQ8IXQ9 262 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 OR5AP2Q8NGF4 316 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 OR52N4Q8NGI2 321 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 RAX2Q96IS3 184 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 ZFP64Q9NPA5 681 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 ZDHHC18Q9NUE0 388 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 PLAGL1Q9UM63 463 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 EXO1Q9UQ84 846 aaKnown RBP2.45□□□□□ -2.02
CHD9-202ENST00000398510 TMEM218A2RU14 115 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 FCER1GP30273 86 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 RPS20P60866 119 aaKnown RBP2.45□□□□□ -2.02
CHD9-202ENST00000398510 ERVK11-1P61568 191 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 RHOBP62745 196 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 TNFAIP6P98066 277 aaPredicted RBP2.45□□□□□ -2.02
CHD9-202ENST00000398510 ZXDAP98168 799 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 PMPCAQ10713 525 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 CD226Q15762 336 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 DEFB109BQ30KR1 87 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 PLPPR5Q32ZL2 321 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 TMEM240Q5SV17 173 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 HES3Q5TGS1 186 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 ZNF691Q5VV52 312 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 MEX3BQ6ZN04 569 aaKnown RBP2.45□□□□□ -2.02
CHD9-202ENST00000398510 ZNF793Q6ZN11 406 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 SLC16A13Q7RTY0 426 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 TP53INP2Q8IXH6 220 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 C2CD4CQ8TF44 421 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 KTI12Q96EK9 354 aaPredicted RBP2.45□□□□□ -2.02
CHD9-202ENST00000398510 CCDC120Q96HB5 630 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 ABHD14BQ96IU4 210 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 TBX5Q99593 518 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 LANCL2Q9NS86 450 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 GALPQ9UBC7 116 aa2.45□□□□□ -2.02
CHD9-202ENST00000398510 TEX50A0A1B0GTY4 177 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 H0Y8G0 127 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 HOXA6P31267 233 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 RPL8P62917 257 aaKnown RBP2.44□□□□□ -2.02
CHD9-202ENST00000398510 FAM106AQ4KMX7 169 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 XKR7Q5GH72 579 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 PRAMEF5Q5TYX0 476 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 PRAMEF6Q5VXH4 476 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 PARM1Q6UWI2 310 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 PTRH1Q86Y79 214 aaKnown RBP2.44□□□□□ -2.02
CHD9-202ENST00000398510 MRGPRDQ8TDS7 321 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 ROBO4Q8WZ75 1007 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 ABHD1Q96SE0 405 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 SSX3Q99909 188 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 NPFFR1Q9GZQ6 430 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 RBFOX1Q9NWB1 397 aaKnown RBP2.44□□□□□ -2.02
CHD9-202ENST00000398510 SF3B6Q9Y3B4 125 aaKnown RBP2.44□□□□□ -2.02
CHD9-202ENST00000398510 COL4A1P02462 1669 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 TNRC6BQ9UPQ9 1833 aaKnown RBP2.44□□□□□ -2.02
CHD9-202ENST00000398510 SHANK1Q9Y566 2161 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 SERTM1A2A2V5 107 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 DLL1O00548 723 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 ST8SIA3O43173 380 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 SLC16A7O60669 478 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 UPK1BO75841 260 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 PGA4P0DJD7 388 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 PGA5P0DJD9 388 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 NTF3P20783 257 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 VDAC1P21796 283 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 OR1E2P47887 323 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 SELENOTP62341 195 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 FOXC1Q12948 553 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 ODF4Q2M2E3 257 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 EBLN2Q6P2I7 272 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 SEZ6L2Q6UXD5 910 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 TOMM20LQ6UXN7 152 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 ZNF740Q8NDX6 193 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 OR2A1Q8NGT9 310 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 SPPL3Q8TCT6 385 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 TMEM70Q9BUB7 260 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 TMPRSS13Q9BYE2 586 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 ZNF395Q9H8N7 513 aaPredicted RBP2.44□□□□□ -2.02
CHD9-202ENST00000398510 SLC7A10Q9NS82 523 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 ASH2LQ9UBL3 628 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 R4GMQ9 66 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 TRAV1-2A0A0B4J238 106 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 DCTN6O00399 190 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 ZNF593O00488 134 aaPredicted RBP2.44□□□□□ -2.02
CHD9-202ENST00000398510 DUS4LO95620 317 aaKnown RBP2.44□□□□□ -2.02
CHD9-202ENST00000398510 PPP1R3DO95685 299 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 RD3LP0DJH9 198 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 B4GALNT1Q00973 533 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 HYAL4Q2M3T9 481 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 PDPNQ86YL7 162 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 NETO2Q8NC67 525 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 GPR26Q8NDV2 337 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 DUSP18Q8NEJ0 188 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 SSC4DQ8WTU2 575 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 SLC25A46Q96AG3 418 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 ORAI1Q96D31 301 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 EID2BQ96D98 161 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 MS4A6EQ96DS6 147 aa2.44□□□□□ -2.02
CHD9-202ENST00000398510 NSUN5Q96P11 429 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms