RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SLC7A11Q9UPY5 501 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 SLC22A13Q9Y226 551 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 IGHV3OR15-7A0A075B7D8 119 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 TRAV40A0A0B4J280 105 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 TMEM89A2RUT3 159 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 OR2AT4A6NND4 320 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 E9PQ18 207 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 NOS1APO75052 506 aaPredicted RBP11.55□□□□□ -0.56
SEC13-204ENST00000397099 GATBO75879 557 aaKnown RBP11.55□□□□□ -0.56
SEC13-204ENST00000397099 CAV3P56539 151 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 UBA52P62987 128 aaKnown RBP11.55□□□□□ -0.56
SEC13-204ENST00000397099 BAMBIQ13145 260 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 SMIM21Q3B7S5 101 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 CDONQ4KMG0 1287 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 TMEM244Q5VVB8 128 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 ZBTB49Q6ZSB9 765 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 CATSPERDQ86XM0 798 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 PQLC1Q8N2U9 271 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 SIGLECL1Q8N7X8 197 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 C3orf56Q8N813 242 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 ZDHHC22Q8N966 263 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 OR14K1Q8NGZ2 314 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 ANGPTL6Q8NI99 470 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 NPRL2Q8WTW4 380 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 GATAD2BQ8WXI9 593 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 AQP3Q92482 292 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 STMN2Q93045 179 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 CCL13Q99616 98 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 PCGF1Q9BSM1 259 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 TTTY10Q9BZA0 68 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 PRDM13Q9H4Q3 707 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 PPP1R3EQ9H7J1 279 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 SMURF1Q9HCE7 757 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 NOX4Q9NPH5 578 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 GMPPBQ9Y5P6 360 aa11.55□□□□□ -0.56
SEC13-204ENST00000397099 A0A1B0GTI1 187 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 J3QT63 122 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 SIGLEC5O15389 551 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 AKR7A2O43488 359 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 SYT7O43581 403 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 RPP14O95059 124 aaKnown RBP11.54□□□□□ -0.56
SEC13-204ENST00000397099 IGHV4-38-2P0DP08 117 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 CFPP27918 469 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 ISL1P61371 349 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 MRPL28Q13084 256 aaKnown RBP11.54□□□□□ -0.56
SEC13-204ENST00000397099 FDX2Q6P4F2 183 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 ZNF788Q6ZQV5 615 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 C1orf122Q6ZSJ8 110 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 ACBD7Q8N6N7 88 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 LY6G5BQ8NDX9 201 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 C8orf46Q8TAG6 207 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 TBC1D15Q8TC07 691 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 PP6455Q8WZ26 134 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 RORBQ92753 470 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 RNFT2Q96EX2 444 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 TBX5Q99593 518 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 PKIBQ9C010 78 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 INPP5EQ9NRR6 644 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 GNG8Q9UK08 70 aa11.54□□□□□ -0.56
SEC13-204ENST00000397099 TRBV23-1A0A0A0MS06 115 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 A0A1W2PPH5 198 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 DAPL1A0PJW8 107 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 PQLC2LA1A4F0 135 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 ANKRD61A6NGH8 418 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 J3QRE1 110 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 ENTPD6O75354 484 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 FADS2O95864 444 aaKnown RBP11.53□□□□□ -0.56
SEC13-204ENST00000397099 ISG15P05161 165 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 RNASE1P07998 156 aaKnown RBP11.53□□□□□ -0.56
SEC13-204ENST00000397099 MMP9P14780 707 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 MPZP25189 248 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 HAAOP46952 286 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 CCR9P51686 369 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 GUCA2AQ02747 115 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 FOXL1Q12952 345 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 BLMHQ13867 455 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 CNN3Q15417 329 aaKnown RBP11.53□□□□□ -0.56
SEC13-204ENST00000397099 ZSCAN26Q16670 478 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 ZIK1Q3SY52 487 aaPredicted RBP11.53□□□□□ -0.56
SEC13-204ENST00000397099 HAGHLQ6PII5 290 aaPredicted RBP11.53□□□□□ -0.56
SEC13-204ENST00000397099 METAP1DQ6UB28 335 aaPredicted RBP11.53□□□□□ -0.56
SEC13-204ENST00000397099 SSX6Q7RTT6 188 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 TMEM86BQ8N661 226 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 POC1AQ8NBT0 407 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 DCTN5Q9BTE1 182 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 SIRPDQ9H106 197 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 WDR13Q9H1Z4 485 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 RASSF4Q9H2L5 321 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 NEK6Q9HC98 313 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 ESM1Q9NQ30 184 aa11.53□□□□□ -0.56
SEC13-204ENST00000397099 SLC25A10Q9UBX3 287 aaPredicted RBP11.53□□□□□ -0.56
SEC13-204ENST00000397099 EXOGQ9Y2C4 368 aaKnown RBP11.53□□□□□ -0.56
SEC13-204ENST00000397099 CAB39Q9Y376 341 aaPredicted RBP11.53□□□□□ -0.56
SEC13-204ENST00000397099 LOC100130705A0A1B0GUX0 176 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 DNAJC9-AS1A6NH13 148 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 SLC1A7O00341 560 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 SLC16A6O15403 523 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 PGA5P0DJD9 388 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 FUT6P51993 359 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 ARF6P62330 175 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms