RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 TNFSF11O14788 317 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 RRP8O43159 456 aaKnown RBP9.33□□□□□ -0.92
COL4A4-201ENST00000396625 SMIM18P0DKX4 95 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 OR1D5P58170 312 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 ZNF252P-AS1Q0IIN9 211 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 RTP2Q5QGT7 225 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 STAC2Q6ZMT1 411 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 RBPJLQ9UBG7 517 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 CTSAP10619 480 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 PBOV1Q9GZY1 135 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 PYCARD-AS1I3L0S3 204 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 EVX1P49640 407 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 XKR7Q5GH72 579 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 TRAT1Q6PIZ9 186 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 ZNF383Q8NA42 475 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 OR5AU1Q8NGC0 362 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 MBD3L1Q8WWY6 194 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 TMEM56Q96MV1 263 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 PRR14Q9BWN1 585 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 CAMTA1Q9Y6Y1 1673 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 SERPINE3A8MV23 424 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 ADAM20O43506 726 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 CST4P01036 141 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 OR2T10Q8NGZ9 312 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 HCFC1R1Q9NWW0 138 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 DOK5Q9P104 306 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 LOC107984156A0A0G2JMH3 177 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 ZNF121P58317 390 aaPredicted RBP9.33□□□□□ -0.92
COL4A4-201ENST00000396625 CLN3Q13286 438 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 ARL17AQ8IVW1 177 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 GABARAPL3Q9BY60 117 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 DUSP21Q9H596 190 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 CTBSQ01459 385 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 FABP5Q01469 135 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 ZNF788Q6ZQV5 615 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 C10orf126Q8N4M7 172 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 GRAMD2BQ96HH9 432 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 USP3Q9Y6I4 520 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 POU2F2P09086 479 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 IQCF3P0C7M6 154 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 SMUG1Q53HV7 270 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 DNLZQ5SXM8 178 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 DPPA3Q6W0C5 159 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 ZNF738Q8NE65 137 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 ARAP2Q8WZ64 1704 aa9.33□□□□□ -0.92
COL4A4-201ENST00000396625 TLCD2A6NGC4 264 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 CA2P00918 260 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 HRASP01112 189 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 ZBTB25P24278 435 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 NMUP48645 174 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 VMA21Q3ZAQ7 101 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 CAMKMTQ7Z624 323 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 UBE2FQ969M7 185 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 ISLRO14498 428 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 MYOZ3Q8TDC0 251 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 ACOT8O14734 319 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 GLDNQ6ZMI3 551 aaPredicted RBP9.32□□□□□ -0.92
COL4A4-201ENST00000396625 POMT2Q9UKY4 750 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 GBF1Q92538 1859 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 HSPB2A8KAH6 182 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 TMPRSS11DO60235 418 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 SLC2A10O95528 541 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 LIM2P55344 173 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 HSPB2Q16082 182 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 LIPNQ5VXI9 398 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 ARL6IP6Q8N6S5 226 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 SMIM4Q8WVI0 70 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 TEAD3Q99594 435 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 CSNK1G1Q9HCP0 422 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 DHRS7CA6NNS2 312 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 APCSP02743 223 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 ZNF26P17031 533 aaPredicted RBP9.32□□□□□ -0.92
COL4A4-201ENST00000396625 WFDC8Q8IUA0 241 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 C5orf17Q8NAS9 161 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 Q9N2K0 584 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 SH2D2AQ9NP31 389 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 A0A1B0GX78 115 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 SPNP16150 400 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 MMP15P51511 669 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 ZNF77Q15935 545 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 OR2I1PQ8NGU4 316 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 VN1R17PQ8TDU5 208 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 ROBO4Q8WZ75 1007 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 HAPLN2Q9GZV7 340 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 CACNA1EQ15878 2313 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 NCKAP5O14513 1909 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 IGSF23A1L1A6 192 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 FZD9O00144 591 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 HOXA4Q00056 320 aaPredicted RBP9.32□□□□□ -0.92
COL4A4-201ENST00000396625 D2HGDHQ8N465 521 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 ANKLE1Q8NAG6 615 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 FAM174AQ8TBP5 190 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 LYRM4Q9HD34 91 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 SDK2Q58EX2 2172 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 COL11A1P12107 1806 aaPredicted RBP9.32□□□□□ -0.92
COL4A4-201ENST00000396625 A0A1W2PN81 502 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 GPX5O75715 221 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 NID1P14543 1247 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 TMEM65Q6PI78 240 aa9.32□□□□□ -0.92
COL4A4-201ENST00000396625 OSR2Q8N2R0 312 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms