RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 CPT2P23786 658 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 ADH6P28332 368 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 SLC35A1P78382 337 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 H3F3AP84243 136 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 RSPO4Q2I0M5 234 aaPredicted RBP13.75□□□□□ -0.21
HOXA3-202ENST00000396352 IAH1Q2TAA2 248 aaPredicted RBP13.75□□□□□ -0.21
HOXA3-202ENST00000396352 DMBX1Q8NFW5 382 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 PP6455Q8WZ26 134 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 PIGTQ969N2 578 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 HDHD3Q9BSH5 251 aaPredicted RBP13.75□□□□□ -0.21
HOXA3-202ENST00000396352 NELFAQ9H3P2 528 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 TUBD1Q9UJT1 453 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 MEX3AA1L020 520 aaKnown RBP13.74□□□□□ -0.21
HOXA3-202ENST00000396352 ZNF98A6NK75 572 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 C9JQL5 133 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 RNASEK-C17orf49H0YIS7 233 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 RRP8O43159 456 aaKnown RBP13.74□□□□□ -0.21
HOXA3-202ENST00000396352 OTX1P32242 354 aaPredicted RBP13.74□□□□□ -0.21
HOXA3-202ENST00000396352 SHBQ15464 509 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 C10orf128Q5T292 105 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 FOXL2NBQ6ZUU3 175 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 GALNTL5Q7Z4T8 443 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 ZNF2Q9BSG1 426 aaPredicted RBP13.74□□□□□ -0.21
HOXA3-202ENST00000396352 PIGLQ9Y2B2 252 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 SDK1Q7Z5N4 2213 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 DEDDO75618 318 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 CST4P01036 141 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 RPL12P30050 165 aaKnown RBP13.74□□□□□ -0.21
HOXA3-202ENST00000396352 EIF1P41567 113 aaKnown RBP13.74□□□□□ -0.21
HOXA3-202ENST00000396352 RPL35P42766 123 aaKnown RBP13.74□□□□□ -0.21
HOXA3-202ENST00000396352 AFF3P51826 1226 aaKnown RBP13.74□□□□□ -0.21
HOXA3-202ENST00000396352 EIF5AP63241 154 aaKnown RBP13.74□□□□□ -0.21
HOXA3-202ENST00000396352 HIST1H3AP68431 136 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 HIST2H3PS2Q5TEC6 136 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 PRAMEF20Q5VT98 475 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 HIST2H3AQ71DI3 136 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 GJC3Q8NFK1 279 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 RXFP4Q8TDU9 374 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 TMEM54Q969K7 222 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 CRB3Q9BUF7 120 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 DECR2Q9NUI1 292 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 MTCH2Q9Y6C9 303 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 CRYM-AS1A6NIL9 109 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 TLX3O43711 291 aaPredicted RBP13.74□□□□□ -0.21
HOXA3-202ENST00000396352 CD63P08962 238 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 RBMXP38159 391 aaKnown RBP13.74□□□□□ -0.21
HOXA3-202ENST00000396352 PPA1Q15181 289 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 EIF5AL1Q6IS14 154 aaKnown RBP13.74□□□□□ -0.21
HOXA3-202ENST00000396352 GLYATL2Q8WU03 294 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 LIME1Q9H400 295 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 FBXL17Q9UF56 701 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 PCDHGA1Q9Y5H4 931 aa13.74□□□□□ -0.21
HOXA3-202ENST00000396352 RTTNQ86VV8 2226 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 BCAT2O15382 392 aaPredicted RBP13.73□□□□□ -0.21
HOXA3-202ENST00000396352 SPP1P10451 314 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 ID4P47928 161 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 CSNK1A1P48729 337 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 ZNF133P52736 654 aaPredicted RBP13.73□□□□□ -0.21
HOXA3-202ENST00000396352 PDZK1IP1Q13113 114 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 LRRC18Q8N456 261 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 Q96M66 194 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 PARP11Q9NR21 331 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 AMDHD2Q9Y303 409 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 K7EPK0 472 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 CRYBA1P05813 215 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 CTSDP07339 412 aaPredicted RBP13.73□□□□□ -0.21
HOXA3-202ENST00000396352 DBHP09172 617 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 GABRR1P24046 479 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 RPUSD3Q6P087 351 aaKnown RBP13.73□□□□□ -0.21
HOXA3-202ENST00000396352 SULF2Q8IWU5 870 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 FAM71E2Q8N5Q1 922 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 DNASE2BQ8WZ79 361 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 ZNF385AQ96PM9 386 aaKnown RBP13.73□□□□□ -0.21
HOXA3-202ENST00000396352 PIGQQ9BRB3 760 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 ELL3Q9HB65 397 aaPredicted RBP13.73□□□□□ -0.21
HOXA3-202ENST00000396352 KIAA1549Q9HCM3 1950 aa13.73□□□□□ -0.21
HOXA3-202ENST00000396352 ECI1P42126 302 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 CTAG1AP78358 180 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 ARL6IP1Q15041 203 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 RTL6Q6ICC9 239 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 FNDC9Q8TBE3 224 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 MRPL24Q96A35 216 aaKnown RBP13.72□□□□□ -0.21
HOXA3-202ENST00000396352 S100A13Q99584 98 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 COA4Q9NYJ1 87 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 FBXO24O75426 580 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 ONECUT2O95948 504 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 GAPDHP04406 335 aaKnown RBP13.72□□□□□ -0.21
HOXA3-202ENST00000396352 AKR1D1P51857 326 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 TMEM123Q8N131 208 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 LYPD6BQ8NI32 183 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 PLEKHJ1Q9NW61 149 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 IGHV3-15A0A0B4J1V0 119 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 AGPAT2O15120 278 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 FKBP2P26885 142 aaKnown RBP13.72□□□□□ -0.21
HOXA3-202ENST00000396352 FCGR2CP31995 323 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 SNAI3Q3KNW1 292 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 GGNBP1Q5YKI7 109 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 SGPP2Q8IWX5 399 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 PRRX2Q99811 253 aa13.72□□□□□ -0.21
HOXA3-202ENST00000396352 CMSS1Q9BQ75 279 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms