RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 PUSL1Q8N0Z8 303 aaKnown RBP11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 OR4A4PQ8NGN8 299 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 M1APQ8TC57 530 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 METTL8Q9H825 291 aaKnown RBP11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 MSR1P21757 451 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 H3F3AP84243 136 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 VAX1Q5SQQ9 334 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 OR2A2Q6IF42 318 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 LHFPL1Q86WI0 220 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 GTPBP8Q8N3Z3 284 aaPredicted RBP11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 ZIC4Q8N9L1 334 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 OR56B1Q8NGI3 324 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 MARC2Q969Z3 335 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 CPNE2Q96FN4 548 aaPredicted RBP11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 OCSTAMPQ9BR26 566 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 MOB1AQ9H8S9 216 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 HPF1Q9NWY4 346 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 PADI1Q9ULC6 663 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 R4GN57 208 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 A0A0J9YW62 118 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 TEX13DA0A0J9YY54 714 aaPredicted RBP11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 B4E171 279 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 CTRB1P17538 263 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 OPRM1P35372 400 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 TSPAN7P41732 249 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 CTRB2Q6GPI1 263 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 FAHD2BQ6P2I3 314 aaPredicted RBP11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 ZNF585AQ6P3V2 769 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 RAB11FIP2Q7L804 512 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 PPP1R32Q7Z5V6 425 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 PCSK5Q92824 1860 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 FAHD2AQ96GK7 314 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 NKX6-2Q9C056 277 aaPredicted RBP11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 ZC4H2Q9NQZ6 224 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 PLEK2Q9NYT0 353 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 PLA2G2EQ9NZK7 142 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 TCFL5Q9UL49 500 aa11.77□□□□□ -0.52
GTF2F1-201ENST00000394456 IGKV1-27A0A075B6S5 117 aa11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 SPEM2Q0P670 501 aa11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 Q0VFX4 171 aa11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 KCNMB1Q16558 191 aa11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 MST1LQ2TV78 715 aa11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 FAM89BQ8N5H3 189 aa11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 ADPRHL1Q8NDY3 354 aa11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 CT55Q8WUE5 264 aa11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 CDC6Q99741 560 aa11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 PIGQQ9BRB3 760 aa11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 FAAP24Q9BTP7 215 aa11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 PARP12Q9H0J9 701 aaKnown RBP11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 KIAA1549Q9HCM3 1950 aa11.77□□□□□ -0.53
GTF2F1-201ENST00000394456 FAM230AA0A1W2PPH8 454 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 F8VVB4 439 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 F8VWA3 439 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 GSK3AP49840 483 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 MLF1P58340 268 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 SLC35A1P78382 337 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 TAF9Q16594 264 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 SP6Q3SY56 376 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 DBX2Q6ZNG2 339 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 PEG10Q86TG7 708 aaKnown RBP11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 YRDCQ86U90 279 aaKnown RBP11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 BAP18Q8IXM2 172 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 TMEM123Q8N131 208 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 OR9K2Q8NGE7 335 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 SGK3Q96BR1 496 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 URM1Q9BTM9 101 aaKnown RBP11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 HDGFL3Q9Y3E1 203 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 IGLV3-1P01715 115 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 FAM157CP0CG43 387 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 PRF1P14222 555 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 SPINK2P20155 84 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 EIF1P41567 113 aaKnown RBP11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 ECH1Q13011 328 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 TSPO2Q5TGU0 170 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 RPL7L1Q6DKI1 246 aaKnown RBP11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 C6orf15Q6UXA7 325 aaPredicted RBP11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 LDLRAD3Q86YD5 345 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 ARRDC1Q8N5I2 433 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 FGFBP3Q8TAT2 258 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 BSCL2Q96G97 398 aaPredicted RBP11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 ANGPTL4Q9BY76 406 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 SMIM3Q9BZL3 60 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 NMES1Q9C002 83 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 TLNRD1Q9H1K6 362 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 HRH4Q9H3N8 390 aa11.76□□□□□ -0.53
GTF2F1-201ENST00000394456 PCNX2A6NKB5 2137 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 TRBV6-7A0A0A0MS04 114 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 TMEM218A2RU14 115 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 NPIPA2E9PIF3 369 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 NPIPA3F8WFD2 350 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 M0R135 149 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 AGPAT2O15120 278 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 FGF16O43320 207 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 DHHO43323 396 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 DHRS3O75911 302 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 JMJD7P0C870 316 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 NAT2P11245 290 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 LIFP15018 202 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 TBPP20226 339 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 FPR2P25090 351 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms