RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 CD163Q86VB7 1156 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 C17orf78Q8N4C9 275 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 ZNF610Q8N9Z0 462 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 OR4D10Q8NGI6 311 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 NKIRAS2Q9NYR9 191 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 MFNGO00587 321 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 PRAF2O60831 178 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 TOXO94900 526 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 RAB3DO95716 219 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 CBR1P16152 277 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 HOXC12P31275 282 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 TIMP3P35625 211 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 GNG2P59768 71 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 PRDX4Q13162 271 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 ARL6IP1Q15041 203 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 P2RY6Q15077 328 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 RSU1Q15404 277 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 RBMS2Q15434 407 aaKnown RBP18.4■□□□□ 0.54
SPHK1-202ENST00000392496 ATAD3CQ5T2N8 411 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 RFPL4BQ6ZWI9 263 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 WDR31Q8NA23 367 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 OR8S1Q8NH09 359 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 NUDCD2Q8WVJ2 157 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 DVL3Q92997 716 aaPredicted RBP18.4■□□□□ 0.54
SPHK1-202ENST00000392496 PAPOLGQ9BWT3 736 aaKnown RBP18.4■□□□□ 0.54
SPHK1-202ENST00000392496 CDH20Q9HBT6 801 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 IL36GQ9NZH8 169 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 GPR160Q9UJ42 338 aa18.4■□□□□ 0.54
SPHK1-202ENST00000392496 CD300LBA8K4G0 201 aa18.39■□□□□ 0.53
SPHK1-202ENST00000392496 ZNF736B4DX44 427 aaPredicted RBP18.39■□□□□ 0.53
SPHK1-202ENST00000392496 SPRY1O43609 319 aaPredicted RBP18.39■□□□□ 0.53
SPHK1-202ENST00000392496 IL2RAP01589 272 aa18.39■□□□□ 0.53
SPHK1-202ENST00000392496 IDH3GP51553 393 aaPredicted RBP18.39■□□□□ 0.53
SPHK1-202ENST00000392496 PDZK1IP1Q13113 114 aa18.39■□□□□ 0.53
SPHK1-202ENST00000392496 BEND4Q6ZU67 534 aa18.39■□□□□ 0.53
SPHK1-202ENST00000392496 ZDHHC23Q8IYP9 409 aa18.39■□□□□ 0.53
SPHK1-202ENST00000392496 GIMAP1Q8WWP7 306 aa18.39■□□□□ 0.53
SPHK1-202ENST00000392496 ARHGAP5-AS1Q96IT6 56 aa18.39■□□□□ 0.53
SPHK1-202ENST00000392496 Q96M66 194 aa18.39■□□□□ 0.53
SPHK1-202ENST00000392496 OPN3Q9H1Y3 402 aaPredicted RBP18.39■□□□□ 0.53
SPHK1-202ENST00000392496 OR10A4Q9H209 315 aa18.39■□□□□ 0.53
SPHK1-202ENST00000392496 ZNF71Q9NQZ8 489 aaPredicted RBP18.39■□□□□ 0.53
SPHK1-202ENST00000392496 EIF3KQ9UBQ5 218 aaKnown RBP18.39■□□□□ 0.53
SPHK1-202ENST00000392496 FLVCR2Q9UPI3 526 aa18.39■□□□□ 0.53
SPHK1-202ENST00000392496 KCNK7Q9Y2U2 307 aa18.39■□□□□ 0.53
SPHK1-202ENST00000392496 PTPRQQ9UMZ3 2332 aa18.38■□□□□ 0.53
SPHK1-202ENST00000392496 A0A1W2PR80 420 aa18.38■□□□□ 0.53
SPHK1-202ENST00000392496 ANGPTL7O43827 346 aa18.38■□□□□ 0.53
SPHK1-202ENST00000392496 SSX5O60225 188 aa18.38■□□□□ 0.53
SPHK1-202ENST00000392496 HTR3BO95264 441 aa18.38■□□□□ 0.53
SPHK1-202ENST00000392496 CSTBP04080 98 aaKnown RBP18.38■□□□□ 0.53
SPHK1-202ENST00000392496 CELA3BP08861 270 aa18.38■□□□□ 0.53
SPHK1-202ENST00000392496 MECP2P51608 486 aaKnown RBP18.38■□□□□ 0.53
SPHK1-202ENST00000392496 TSC22D1Q15714 1073 aa18.38■□□□□ 0.53
SPHK1-202ENST00000392496 CXorf67Q86X51 503 aaPredicted RBP18.38■□□□□ 0.53
SPHK1-202ENST00000392496 CNTNAP3BQ96NU0 1288 aa18.38■□□□□ 0.53
SPHK1-202ENST00000392496 CNTNAP3Q9BZ76 1288 aa18.38■□□□□ 0.53
SPHK1-202ENST00000392496 OBP2BQ9NPH6 170 aa18.38■□□□□ 0.53
SPHK1-202ENST00000392496 ANAPC10Q9UM13 185 aa18.38■□□□□ 0.53
SPHK1-202ENST00000392496 PQLC2LA1A4F0 135 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 ARPC1BO15143 372 aaKnown RBP18.37■□□□□ 0.53
SPHK1-202ENST00000392496 FCER2P06734 321 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 BLVRBP30043 206 aaPredicted RBP18.37■□□□□ 0.53
SPHK1-202ENST00000392496 TDGF1P3P51864 188 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 CEACAM21Q3KPI0 293 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 RTN4RL2Q86UN3 420 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 MYPOPQ86VE0 399 aaPredicted RBP18.37■□□□□ 0.53
SPHK1-202ENST00000392496 Q8NA96 180 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 ZSCAN4Q8NAM6 433 aaPredicted RBP18.37■□□□□ 0.53
SPHK1-202ENST00000392496 OR51S1Q8NGJ8 323 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 OR51J1Q9H342 316 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 IFT46Q9NQC8 304 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 NPDC1Q9NQX5 325 aaPredicted RBP18.37■□□□□ 0.53
SPHK1-202ENST00000392496 PCDHB16Q9NRJ7 776 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 CA11O75493 328 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 IGKV3-15P01624 115 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 MEF2DQ14814 521 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 ST3GAL2Q16842 350 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 MRPS24Q96EL2 167 aaKnown RBP18.37■□□□□ 0.53
SPHK1-202ENST00000392496 PECRQ9BY49 303 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 MED28Q9H204 178 aa18.37■□□□□ 0.53
SPHK1-202ENST00000392496 TP63Q9H3D4 680 aaPredicted RBP18.37■□□□□ 0.53
SPHK1-202ENST00000392496 A0A1B0GUH1 482 aa18.36■□□□□ 0.53
SPHK1-202ENST00000392496 A8MV72 311 aaPredicted RBP18.36■□□□□ 0.53
SPHK1-202ENST00000392496 SMPD2O60906 423 aa18.36■□□□□ 0.53
SPHK1-202ENST00000392496 PLATP00750 562 aa18.36■□□□□ 0.53
SPHK1-202ENST00000392496 CEACAM8P31997 349 aaPredicted RBP18.36■□□□□ 0.53
SPHK1-202ENST00000392496 CBX5P45973 191 aa18.36■□□□□ 0.53
SPHK1-202ENST00000392496 FBXW12Q6X9E4 464 aa18.36■□□□□ 0.53
SPHK1-202ENST00000392496 GINS4Q9BRT9 223 aa18.36■□□□□ 0.53
SPHK1-202ENST00000392496 CRIM1Q9NZV1 1036 aa18.36■□□□□ 0.53
SPHK1-202ENST00000392496 MPC1Q9Y5U8 109 aa18.36■□□□□ 0.53
SPHK1-202ENST00000392496 IGKV1-12A0A0C4DH73 117 aa18.35■□□□□ 0.53
SPHK1-202ENST00000392496 ANKRD30BLA7E2S9 258 aa18.35■□□□□ 0.53
SPHK1-202ENST00000392496 SERPINE3A8MV23 424 aa18.35■□□□□ 0.53
SPHK1-202ENST00000392496 AKR7A2O43488 359 aa18.35■□□□□ 0.53
SPHK1-202ENST00000392496 IGKV1D-12P01611 117 aa18.35■□□□□ 0.53
SPHK1-202ENST00000392496 ZNF735P0CB33 412 aa18.35■□□□□ 0.53
SPHK1-202ENST00000392496 NAT1P18440 290 aa18.35■□□□□ 0.53
SPHK1-202ENST00000392496 TBPP20226 339 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms