RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 B3GALT5Q9Y2C3 310 aa3.03□□□□□ -1.92
TRAV39-201ENST00000390466 MRPS18CQ9Y3D5 142 aaKnown RBP3.03□□□□□ -1.92
TRAV39-201ENST00000390466 SLCO1B1Q9Y6L6 691 aa3.03□□□□□ -1.92
TRAV39-201ENST00000390466 UNC80Q8N2C7 3258 aa3.03□□□□□ -1.92
TRAV39-201ENST00000390466 TRAV1-1A0A0B4J248 108 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 IGKV1-9A0A0C4DH69 117 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 LOC102723971A0A1B0GUV8 181 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 IGSF23A1L1A6 192 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 C5orf63A6NC05 138 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 TMEM210A6NLX4 147 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 DHRS7CA6NNS2 312 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 ZNF732B4DXR9 585 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 IFNL4K9M1U5 179 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 P2RY10O00398 339 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 GPR137BO60478 399 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 CDC14BO60729 498 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 PITX3O75364 302 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 SCAF4O95104 1147 aaKnown RBP3.02□□□□□ -1.93
TRAV39-201ENST00000390466 MPZL1O95297 269 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 SEMA4FO95754 770 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 IL33O95760 270 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 TSPAN15O95858 294 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 ADH1CP00326 375 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 IGHG1P01857 330 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 TRGC2P03986 189 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 HSPB1P04792 205 aaKnown RBP3.02□□□□□ -1.93
TRAV39-201ENST00000390466 HEXBP07686 556 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 SPARCP09486 303 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 SLC35G6P0C7Q6 338 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 PET100P0DJ07 73 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 OR13C7P0DN81 318 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 ADH5P11766 374 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 CCL5P13501 91 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 CEACAM1P13688 526 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 PVRP15151 417 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 RAB4AP20338 218 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 EPHA1P21709 976 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 GLRA1P23415 457 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 CHATP28329 748 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 S100A2P29034 98 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 APLNRP35414 380 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 CD200P41217 278 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 GRK6P43250 576 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 RPS10P46783 165 aaKnown RBP3.02□□□□□ -1.93
TRAV39-201ENST00000390466 MMP16P51512 607 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 TDGF1P3P51864 188 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 EFNA3P52797 238 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 EMP2P54851 167 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 CLDN6P56747 220 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 ZNF121P58317 390 aaPredicted RBP3.02□□□□□ -1.93
TRAV39-201ENST00000390466 RPL27P61353 136 aaKnown RBP3.02□□□□□ -1.93
TRAV39-201ENST00000390466 RND3P61587 244 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 DEFB103AP81534 67 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 NHLH2Q02577 135 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 FMODQ06828 376 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 TNFRSF9Q07011 255 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 PRDX4Q13162 271 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 SQSTM1Q13501 440 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 KIR2DS3Q14952 304 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 UBE2V2Q15819 145 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 ACKR1Q16570 336 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 IAH1Q2TAA2 248 aaPredicted RBP3.02□□□□□ -1.93
TRAV39-201ENST00000390466 AKIRIN2Q53H80 203 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 HIST2H3PS2Q5TEC6 136 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 DEGS2Q6QHC5 323 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 FIGLAQ6QHK4 219 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 SLC25A26Q70HW3 274 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 SLC35E3Q7Z769 313 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 CACUL1Q86Y37 369 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 TMEM183AQ8IXX5 376 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 RAB42Q8N4Z0 105 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 JAGN1Q8N5M9 183 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 DEFB123Q8N688 67 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 ZNF614Q8N883 585 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 OR4D5Q8NGN0 318 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 OR13C3Q8NGS6 347 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 OR4X1Q8NH49 305 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 CLDND2Q8NHS1 167 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 C16orf52Q8NHV5 167 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 RNASE11Q8TAA1 199 aaKnown RBP3.02□□□□□ -1.93
TRAV39-201ENST00000390466 BAHD1Q8TBE0 780 aaPredicted RBP3.02□□□□□ -1.93
TRAV39-201ENST00000390466 CA5BP1Q8WTZ4 195 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 TMEM171Q8WVE6 324 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 ASB10Q8WXI3 467 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 OR1E3Q8WZA6 343 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 FAM3CQ92520 227 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 ZDHHC16Q969W1 377 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 MSI2Q96DH6 328 aaKnown RBP3.02□□□□□ -1.93
TRAV39-201ENST00000390466 BOD1Q96IK1 185 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 ARHGAP5-AS1Q96IT6 56 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 ADGRG7Q96K78 797 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 NOL4LQ96MY1 436 aaPredicted RBP3.02□□□□□ -1.93
TRAV39-201ENST00000390466 FOXN4Q96NZ1 517 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 G6PC3Q9BUM1 346 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 TPSD1Q9BZJ3 242 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 SMIM3Q9BZL3 60 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 METTL9Q9H1A3 318 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 TXNIPQ9H3M7 391 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 CALHM2Q9HA72 323 aa3.02□□□□□ -1.93
TRAV39-201ENST00000390466 CERS4Q9HA82 394 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms