RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 CHST6Q9GZX3 395 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 PLEKHA3Q9HB20 300 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 KIF25Q9UIL4 384 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 hCG_1809904A0A1W2PP81 198 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 A0A1W2PPE2 198 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 A0A1W2PR64 198 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 A0A1W2PRV1 198 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 SCGB2A1O75556 95 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 UPK3AO75631 287 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 NKX2-1P43699 371 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-203ENST00000380877 ALKBH6Q3KRA9 238 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 TSPO2Q5TGU0 170 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 C17orf107Q6ZR85 190 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 LYG2Q86SG7 212 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 CXorf67Q86X51 503 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-203ENST00000380877 SCCPDHQ8NBX0 429 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 ZNF285Q96NJ3 590 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 UBL7Q96S82 380 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-203ENST00000380877 NEURL2Q9BR09 285 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 OR5H14A6NHG9 310 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 SSX4O60224 188 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 CDC14BO60729 498 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 SEMA7AO75326 666 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 MT-CO2P00403 227 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 MPGP29372 298 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 PIGPP57054 158 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 HBG1P69891 147 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 HBG2P69892 147 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 NUFIP2Q7Z417 695 aaKnown RBP10.81□□□□□ -0.68
GABPB1-203ENST00000380877 C6orf201Q7Z4U5 140 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 PPP1R32Q7Z5V6 425 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 ZNF808Q8N4W9 903 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-203ENST00000380877 TMEM217Q8N7C4 229 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 HSD17B11Q8NBQ5 300 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 OR4A16Q8NH70 328 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 SDSLQ96GA7 329 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 OR2H1Q9GZK4 316 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 FAM212BQ9NTI7 297 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-203ENST00000380877 ZNF354AO60765 605 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-203ENST00000380877 PSMB6P28072 239 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 Q8IYB0 196 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 GPX8Q8TED1 209 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 HAS2Q92819 552 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 KCNJ16Q9NPI9 418 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 SDHAF2Q9NX18 166 aa10.81□□□□□ -0.68
GABPB1-203ENST00000380877 MED12Q93074 2177 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 TOR1AO14656 332 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 SPRY3O43610 288 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 NXPH3O95157 252 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 GSK3AP49840 483 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 PPP1CBP62140 327 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 ZNF468Q5VIY5 522 aaPredicted RBP10.8□□□□□ -0.68
GABPB1-203ENST00000380877 TMUB2Q71RG4 321 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 OR2Z1Q8NG97 314 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 OR13G1Q8NGZ3 307 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 PPP1R3CQ9UQK1 317 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 ENSAO43768 121 aaKnown RBP10.8□□□□□ -0.68
GABPB1-203ENST00000380877 IFNA10P01566 189 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 IL5P05113 134 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 PDLIM3Q53GG5 364 aaPredicted RBP10.8□□□□□ -0.68
GABPB1-203ENST00000380877 AMELYQ99218 206 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 FAAP24Q9BTP7 215 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 CSAG2Q9Y5P2 127 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 NLRC5Q86WI3 1866 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 TSC2P49815 1807 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 MS4A18H0YCH9 400 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 GDF9O60383 454 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 KIR3DL2P43630 455 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 EGR4Q05215 589 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 MS4A18Q3C1V0 323 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 TMEM128Q5BJH2 165 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 FGF11Q92914 225 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 SLC26A1Q9H2B4 701 aa10.8□□□□□ -0.68
GABPB1-203ENST00000380877 ZNF230Q9UIE0 474 aaPredicted RBP10.8□□□□□ -0.68
GABPB1-203ENST00000380877 IGLV1-36A0A0B4J1U3 117 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 KLF4O43474 513 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 PDCD6O75340 191 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 TUBG1P23258 451 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 FAM27BQ5VT28 67 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 TMEM268Q5VZI3 342 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 GLDNQ6ZMI3 551 aaPredicted RBP10.79□□□□□ -0.68
GABPB1-203ENST00000380877 FAM58AQ8N1B3 248 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 HEYLQ9NQ87 328 aaPredicted RBP10.79□□□□□ -0.68
GABPB1-203ENST00000380877 LRRTM1Q86UE6 522 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 ST8SIA4Q92187 359 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 FBXO17Q96EF6 278 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 TIMD4Q96H15 378 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 GUCD1Q96NT3 240 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 FZR1Q9UM11 496 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 OR5B21A6NL26 309 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 NME2P22392 152 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 RAG2P55895 527 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 EIF2S3LQ2VIR3 472 aaKnown RBP10.79□□□□□ -0.68
GABPB1-203ENST00000380877 FBXW9Q5XUX1 488 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 FAM131CQ96AQ9 280 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 MARVELD1Q9BSK0 173 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 FOXJ2Q9P0K8 574 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 A0A1W2PPV4 95 aa10.79□□□□□ -0.68
GABPB1-203ENST00000380877 ANKRD33BA6NCL7 494 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms