RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 BRD7Q9NPI1 651 aa13.82□□□□□ -0.2
HMGN1-203ENST00000380748 NDUFAF4Q9P032 175 aa13.82□□□□□ -0.2
HMGN1-203ENST00000380748 MEX3AA1L020 520 aaKnown RBP13.81□□□□□ -0.2
HMGN1-203ENST00000380748 RFPL4AA6NLU0 287 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 BBIP1A8MTZ0 92 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 C17orf98A8MV24 154 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 FAM90A22PA8MWA6 464 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 RFPL4AL1F8VTS6 287 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 ZNF593O00488 134 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-203ENST00000380748 IDH3BO43837 385 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 MTRF1O75570 445 aaKnown RBP13.81□□□□□ -0.2
HMGN1-203ENST00000380748 CST4P01036 141 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 PIPP12273 146 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-203ENST00000380748 HSD11B1P28845 292 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 SLC15A1P46059 708 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 CEBPDP49716 269 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-203ENST00000380748 OR12D2P58182 307 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 DYNC1I2Q13409 638 aaKnown RBP13.81□□□□□ -0.2
HMGN1-203ENST00000380748 FTMTQ8N4E7 242 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 OR11H6Q8NGC7 330 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 OR51D1Q8NGF3 324 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 OR13D1Q8NGV5 346 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 OR2T4Q8NH00 348 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 OR10A2Q9H208 303 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 ABCB9Q9NP78 766 aa13.81□□□□□ -0.2
HMGN1-203ENST00000380748 FAM32AQ9Y421 112 aaKnown RBP13.81□□□□□ -0.2
HMGN1-203ENST00000380748 A0A0G2JND7 137 aa13.8□□□□□ -0.2
HMGN1-203ENST00000380748 SH2D7A6NKC9 451 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-203ENST00000380748 RHCEP18577 417 aa13.8□□□□□ -0.2
HMGN1-203ENST00000380748 EIF2B1Q14232 305 aaKnown RBP13.8□□□□□ -0.2
HMGN1-203ENST00000380748 SNCBQ16143 134 aa13.8□□□□□ -0.2
HMGN1-203ENST00000380748 ABCA11PQ4W5N1 156 aa13.8□□□□□ -0.2
HMGN1-203ENST00000380748 ZNF770Q6IQ21 691 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-203ENST00000380748 C18orf65Q6ZTR6 163 aa13.8□□□□□ -0.2
HMGN1-203ENST00000380748 TIGD4Q8IY51 512 aa13.8□□□□□ -0.2
HMGN1-203ENST00000380748 ZDHHC23Q8IYP9 409 aa13.8□□□□□ -0.2
HMGN1-203ENST00000380748 DHRS1Q96LJ7 313 aa13.8□□□□□ -0.2
HMGN1-203ENST00000380748 C1orf21Q9H246 121 aa13.8□□□□□ -0.2
HMGN1-203ENST00000380748 OR51I2Q9H344 312 aa13.8□□□□□ -0.2
HMGN1-203ENST00000380748 GID8Q9NWU2 228 aa13.8□□□□□ -0.2
HMGN1-203ENST00000380748 ZMAT5Q9UDW3 170 aaKnown RBP13.8□□□□□ -0.2
HMGN1-203ENST00000380748 SLC1A7O00341 560 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 GSTA4O15217 222 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 GYPBP06028 91 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 CD24P25063 80 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 LIPEQ05469 1076 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 KLF10Q13118 480 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 METTL21CQ5VZV1 264 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 ACP7Q6ZNF0 438 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 ZNF561Q8N587 486 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 Q8NFD4 153 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 DYDC1Q8WWB3 177 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 PGAM5Q96HS1 289 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 ZNF488Q96MN9 340 aa13.79□□□□□ -0.2
HMGN1-203ENST00000380748 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.79□□□□□ -0.2
HMGN1-203ENST00000380748 ZNF732B4DXR9 585 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 RAMP3O60896 148 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 LYL1P12980 280 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 FMO3P31513 532 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 PRDX2P32119 198 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 TEX30Q5JUR7 227 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 LCN8Q6JVE9 175 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 C8orf86Q6ZUL3 223 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 C16orf82Q7Z2V1 217 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 CALHM1Q8IU99 346 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 SLC15A3Q8IY34 581 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 BCAS4Q8TDM0 211 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 AQP3Q92482 292 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 C7orf34Q96L11 122 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 RGCCQ9H4X1 137 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 EGLN3Q9H6Z9 239 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 CD300AQ9UGN4 299 aa13.78□□□□□ -0.2
HMGN1-203ENST00000380748 IGHV1-8P0DP01 117 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 NCK1P16333 377 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 LUMP51884 338 aaPredicted RBP13.77□□□□□ -0.21
HMGN1-203ENST00000380748 RPL23AP62750 156 aaKnown RBP13.77□□□□□ -0.21
HMGN1-203ENST00000380748 GNG3P63215 75 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 HAGHLQ6PII5 290 aaPredicted RBP13.77□□□□□ -0.21
HMGN1-203ENST00000380748 PIGWQ7Z7B1 504 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 OSR2Q8N2R0 312 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 SLC37A3Q8NCC5 494 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 ZNF671Q8TAW3 534 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 NDNFQ8TB73 568 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 RNF133Q8WVZ7 376 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 FAM162AQ96A26 154 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 HIST1H2AAQ96QV6 131 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 AMELYQ99218 206 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 P2RX4Q99571 388 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 LIN7BQ9HAP6 207 aa13.77□□□□□ -0.21
HMGN1-203ENST00000380748 SLC22A2O15244 555 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 APOC1P02654 83 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 TK1P04183 234 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 AMY1AP04745 511 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 AMY2AP04746 511 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 ZNF728P0DKX0 622 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 CLUP10909 449 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 GSSP48637 474 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 SMIM21Q3B7S5 101 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 CEP78Q5JTW2 689 aa13.76□□□□□ -0.21
HMGN1-203ENST00000380748 MINOS1Q5TGZ0 78 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms