RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 C1QTNF3Q9BXJ4 246 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 CYC1P08574 325 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 MELTFP08582 738 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 MGMTP16455 207 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 C15orf39Q6ZRI6 1047 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 MRGPREQ86SM8 312 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 PIK3IP1Q96FE7 263 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 SNRNP200O75643 2136 aaKnown RBP11.16□□□□□ -0.62
CHD3-203ENST00000380358 ADGRB1O14514 1584 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 MPLP40238 635 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 NSUN5P2Q63ZY6 315 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 ZNF574Q6ZN55 896 aaPredicted RBP11.16□□□□□ -0.62
CHD3-203ENST00000380358 EDARADDQ8WWZ3 215 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 FGF14Q92915 247 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 PTX4Q96A99 478 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 CCL21O00585 134 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 GNG7O60262 68 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 LOXL3P58215 753 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 HILPDAQ9Y5L2 63 aa11.16□□□□□ -0.62
CHD3-203ENST00000380358 KLKB1P03952 638 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 LPAR6P43657 344 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 ZNF154Q13106 437 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 FAM122BQ7Z309 247 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 OR8B3Q8NGG8 313 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 ZNF502Q8TBZ5 544 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 MS4A6EQ96DS6 147 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 OR8B2Q96RD0 313 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 AUNIPQ9H7T9 357 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 ASCL3Q9NQ33 180 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 EMCNQ9ULC0 261 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 NWD2Q9ULI1 1742 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 RIMBP3CA6NJZ7 1639 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 RIMBP3BA6NNM3 1639 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 RIMBP3Q9UFD9 1639 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 A0A0A6YYJ9 748 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 SSX1Q16384 188 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 LY6EQ16553 131 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 AMMECR1LQ6DCA0 310 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 NEURL3Q96EH8 262 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 WDR89Q96FK6 387 aaPredicted RBP11.15□□□□□ -0.62
CHD3-203ENST00000380358 KLF3P57682 345 aaPredicted RBP11.15□□□□□ -0.62
CHD3-203ENST00000380358 SMAD4Q13485 552 aaKnown RBP11.15□□□□□ -0.62
CHD3-203ENST00000380358 C9orf50Q5SZB4 431 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 PACRGQ96M98 296 aaPredicted RBP11.15□□□□□ -0.62
CHD3-203ENST00000380358 TMEM204Q9BSN7 226 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 S1PR5Q9H228 398 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 PSORS1C1Q9UIG5 152 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 DAPP1Q9UN19 280 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 ALG1L2C9J202 215 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 ACP1P24666 158 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 THBS4P35443 961 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 SYT14P1Q58G82 188 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 EXTL1Q92935 676 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 OR4C12Q96R67 309 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 FOXB1Q99853 325 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 A0A1W2PPE3 182 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 PRSS37A4D1T9 235 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 OR2T8A6NH00 312 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 EIF4E2O60573 245 aaKnown RBP11.15□□□□□ -0.62
CHD3-203ENST00000380358 CD22P20273 847 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 KIR2DL1P43626 348 aaPredicted RBP11.15□□□□□ -0.62
CHD3-203ENST00000380358 KIR2DL2P43627 348 aaPredicted RBP11.15□□□□□ -0.62
CHD3-203ENST00000380358 TMEM18Q96B42 140 aa11.15□□□□□ -0.62
CHD3-203ENST00000380358 H0YIV9 168 aa11.15□□□□□ -0.63
CHD3-203ENST00000380358 EML2O95834 649 aa11.15□□□□□ -0.63
CHD3-203ENST00000380358 CD81P60033 236 aa11.15□□□□□ -0.63
CHD3-203ENST00000380358 FAAP24Q9BTP7 215 aa11.15□□□□□ -0.63
CHD3-203ENST00000380358 RPS19P39019 145 aaKnown RBP11.14□□□□□ -0.63
CHD3-203ENST00000380358 METRNLQ641Q3 311 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 UBR1Q8IWV7 1749 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 UNCXA6NJT0 531 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 ST8SIA5O15466 376 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 ALPLP05186 524 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 COX6B1P14854 86 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 PAFAH1B2P68402 229 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 ZNF66Q6ZN08 573 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 CA13Q8N1Q1 262 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 ATP5SQ99766 215 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 PCM1Q15154 2024 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 M0R2Z0 102 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 OR3A1P47881 315 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 ACSM5Q6NUN0 579 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 OR52N1Q8NH53 320 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 CCDC88AQ3V6T2 1871 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 FRG2CA6NGY1 282 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 SEMA7AO75326 666 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 SRFP11831 508 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 LIPAP38571 399 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 SLC35D3Q5M8T2 416 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 CIB3Q96Q77 187 aaPredicted RBP11.14□□□□□ -0.63
CHD3-203ENST00000380358 PRR13Q9NZ81 148 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 FCN1O00602 326 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 JTBO76095 146 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 GIPP09681 153 aaPredicted RBP11.14□□□□□ -0.63
CHD3-203ENST00000380358 PTHLHP12272 177 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 CCKARP32238 428 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 PPP1CCP36873 323 aaKnown RBP11.14□□□□□ -0.63
CHD3-203ENST00000380358 RPL29P47914 159 aaKnown RBP11.14□□□□□ -0.63
CHD3-203ENST00000380358 CCR9P51686 369 aa11.14□□□□□ -0.63
CHD3-203ENST00000380358 OTUD1Q5VV17 481 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms