RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 GPR160Q9UJ42 338 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 UBE2NP61088 152 aaKnown RBP17.12■□□□□ 0.33
PDLIM5-205ENST00000380180 TSC22D1Q15714 1073 aa17.12■□□□□ 0.33
PDLIM5-205ENST00000380180 METTL11BQ5VVY1 283 aa17.12■□□□□ 0.33
PDLIM5-205ENST00000380180 ZBTB8BQ8NAP8 495 aaPredicted RBP17.12■□□□□ 0.33
PDLIM5-205ENST00000380180 ABHD17AQ96GS6 310 aa17.12■□□□□ 0.33
PDLIM5-205ENST00000380180 SEC22CQ9BRL7 303 aa17.12■□□□□ 0.33
PDLIM5-205ENST00000380180 PAPOLGQ9BWT3 736 aaKnown RBP17.12■□□□□ 0.33
PDLIM5-205ENST00000380180 OR51B6Q9H340 312 aa17.12■□□□□ 0.33
PDLIM5-205ENST00000380180 PLSCR4Q9NRQ2 329 aa17.12■□□□□ 0.33
PDLIM5-205ENST00000380180 CRIM1Q9NZV1 1036 aa17.12■□□□□ 0.33
PDLIM5-205ENST00000380180 CRYABP02511 175 aaKnown RBP17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 CSTBP04080 98 aaKnown RBP17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 CELA3BP08861 270 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 ZNF14P17017 642 aaPredicted RBP17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 CPT2P23786 658 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 PDZK1IP1Q13113 114 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 MAB21L1Q13394 359 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 PNLIPRP3Q17RR3 467 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 SEM1Q6ZVN7 128 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 MYPOPQ86VE0 399 aaPredicted RBP17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 CCDC36Q8IYA8 594 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 PIAS4Q8N2W9 510 aaPredicted RBP17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 BPIFB2Q8N4F0 458 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 GPR137Q96N19 417 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 SLC6A7Q99884 636 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 IGKV1-12A0A0C4DH73 117 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 SSNA1O43805 119 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 IGKV1D-12P01611 117 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 RLN1P04808 185 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 CSN2P05814 226 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 CXCL3P19876 107 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 PER3P56645 1201 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 PRDX4Q13162 271 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 IDO2Q6ZQW0 420 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 NOXA1Q86UR1 476 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 CD163Q86VB7 1156 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 NAXEQ8NCW5 288 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 Q96M66 194 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 PECRQ9BY49 303 aa17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 MOV10Q9HCE1 1003 aaKnown RBP17.11■□□□□ 0.33
PDLIM5-205ENST00000380180 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.11■□□□□ 0.331e-6■■■■■ 27
PDLIM5-205ENST00000380180 CEP295Q9C0D2 2601 aa17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 MBD3L4A6NDZ8 208 aaPredicted RBP17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 MBD3L3A6NE82 208 aaPredicted RBP17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 MBD3L5A6NJ08 208 aaPredicted RBP17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 TNFSF13O75888 250 aa17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 TPOP07202 933 aa17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 MEF2DQ14814 521 aa17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 NKPD1Q17RQ9 610 aa17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 TBC1D28Q2M2D7 210 aa17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 RFPL4BQ6ZWI9 263 aa17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 CSNK2A3Q8NEV1 391 aa17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 MBD3L2Q8NHZ7 208 aaPredicted RBP17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 ZNF486Q96H40 463 aaPredicted RBP17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 MED30Q96HR3 178 aa17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 ZNF629Q9UEG4 869 aaPredicted RBP17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 HEATR1Q9H583 2144 aaKnown RBP17.1■□□□□ 0.33
PDLIM5-205ENST00000380180 CST4P01036 141 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 IL5P05113 134 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 VSIG10L2P0DP72 767 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 GABRR1P24046 479 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 ARFRP1Q13795 201 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 RNASE10Q5GAN6 216 aaKnown RBP17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 RTL6Q6ICC9 239 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 SLC36A1Q7Z2H8 476 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 CALHM1Q8IU99 346 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 PXT1Q8NFP0 134 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 OR5L1Q8NGL2 311 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 STARD4Q96DR4 205 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 OPA3Q9H6K4 179 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 SCP2D1Q9UJQ7 156 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 ZNF222Q9UK12 451 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 MSRB2Q9Y3D2 182 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 DSPP15924 2871 aaKnown RBP17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 CD300LBA8K4G0 201 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 ZNF780AO75290 641 aaPredicted RBP17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 SULT1A3P0DMM9 295 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 SULT1A4P0DMN0 295 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 COX5AP20674 150 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 HRH1P35367 487 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 IDH3GP51553 393 aaPredicted RBP17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 SF3B4Q15427 424 aaKnown RBP eCLIP17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 ZNF610Q8N9Z0 462 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 OR51F2Q8NH61 342 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 ST8SIA4Q92187 359 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 SNAPC3Q92966 411 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 OCSTAMPQ9BR26 566 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 EIF3KQ9UBQ5 218 aaKnown RBP17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 ZGRF1Q86YA3 2104 aa17.09■□□□□ 0.33
PDLIM5-205ENST00000380180 PQLC2LA1A4F0 135 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 DISC1C4P0D8 188 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 SMLR1H3BR10 107 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 TOXO94900 526 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 IL32P24001 234 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 CXADRP78310 365 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 SCGB2B2Q4G0G5 96 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 INO80CQ6PI98 192 aaPredicted RBP17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 C6orf201Q7Z4U5 140 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 FTMTQ8N4E7 242 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms