RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 AQP3Q92482 292 aa12.72□□□□□ -0.37
RAB4B-202ENST00000378307 ZNF488Q96MN9 340 aa12.72□□□□□ -0.37
RAB4B-202ENST00000378307 DUX5Q96PT3 197 aa12.72□□□□□ -0.37
RAB4B-202ENST00000378307 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.72□□□□□ -0.37
RAB4B-202ENST00000378307 GMPPBQ9Y5P6 360 aa12.72□□□□□ -0.37
RAB4B-202ENST00000378307 TENM1Q9UKZ4 2725 aa12.72□□□□□ -0.37
RAB4B-202ENST00000378307 MDFIC2A0A1B0GVS7 189 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 ZNF879B4DU55 563 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 SYNGR1O43759 233 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 MTRF1O75570 445 aaKnown RBP12.71□□□□□ -0.37
RAB4B-202ENST00000378307 BAG2O95816 211 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 GLRA1P23415 457 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 OR12D2P58182 307 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 NANOS3P60323 173 aaKnown RBP12.71□□□□□ -0.37
RAB4B-202ENST00000378307 ARF6P62330 175 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 DGUOKQ16854 277 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 CLVS2Q5SYC1 327 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 BRD3OSQ6XYD6 125 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 ZNF788Q6ZQV5 615 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 DOK3Q7L591 496 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 C10orf67Q8IYJ2 551 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 BATF2Q8N1L9 274 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 RHOXF1Q8NHV9 184 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 C12orf43Q96C57 262 aaKnown RBP12.71□□□□□ -0.37
RAB4B-202ENST00000378307 LGALS12Q96DT0 336 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 GAFA1Q96PS6 74 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 PCGF1Q9BSM1 259 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 SIRPDQ9H106 197 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 AMBNQ9NP70 447 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 FAM118AQ9NWS6 357 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 DNAJB11Q9UBS4 358 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 RPUSD1Q9UJJ7 312 aaKnown RBP12.71□□□□□ -0.37
RAB4B-202ENST00000378307 GNG8Q9UK08 70 aa12.71□□□□□ -0.37
RAB4B-202ENST00000378307 EXOGQ9Y2C4 368 aaKnown RBP12.71□□□□□ -0.37
RAB4B-202ENST00000378307 IGKV1D-17A0A075B6S4 117 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 LOC100130705A0A1B0GUX0 176 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 PQLC2LA1A4F0 135 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 OR5B21A6NL26 309 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 PSG2P11465 335 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 UBA52P62987 128 aaKnown RBP12.7□□□□□ -0.38
RAB4B-202ENST00000378307 CDONQ4KMG0 1287 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 MEDAGQ5VYS4 303 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 RUSC1-AS1Q66K80 236 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 C9orf139Q6ZV77 190 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 SLC36A1Q7Z2H8 476 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 LY6G5BQ8NDX9 201 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 FAM216AQ8WUB2 273 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 ZFAND2BQ8WV99 257 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 APH1BQ8WW43 257 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 ITFG2Q969R8 447 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 WDFY2Q96P53 400 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 MS4A7Q9GZW8 240 aaPredicted RBP12.7□□□□□ -0.38
RAB4B-202ENST00000378307 NLKQ9UBE8 527 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 ZNF222Q9UK12 451 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 MYRFQ9Y2G1 1151 aa12.7□□□□□ -0.38
RAB4B-202ENST00000378307 CENPVL3A0A0U1RRI6 287 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 OR2AT4A6NND4 320 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 TRIM77I1YAP6 450 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 SYT7O43581 403 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 TOX4O94842 621 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 HAAOP46952 286 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 DLX1P56177 255 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 PRB3Q04118 309 aaPredicted RBP12.69□□□□□ -0.38
RAB4B-202ENST00000378307 ZNF91Q05481 1191 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 UBE2V2Q15819 145 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 ANGPTL5Q86XS5 388 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 CALHM1Q8IU99 346 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 OR2G2Q8NGZ5 317 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 JMJD8Q96S16 334 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 ZNF649Q9BS31 505 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 FRRS1LQ9P0K9 344 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 MAB21L2Q9Y586 359 aa12.69□□□□□ -0.38
RAB4B-202ENST00000378307 IGKV1-27A0A075B6S5 117 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 A0A1B0GVI7 797 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 LOC107986453A0A1B0GWG9 222 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 DAPL1A0PJW8 107 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 ANKRD61A6NGH8 418 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 DNAJC9-AS1A6NH13 148 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 DHRS7CA6NNS2 312 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 ANKRD65E5RJM6 399 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 NDUFB3O43676 98 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 ECDO95905 644 aaPredicted RBP12.68□□□□□ -0.38
RAB4B-202ENST00000378307 LIPFP07098 398 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 ACAA1P09110 424 aaPredicted RBP12.68□□□□□ -0.38
RAB4B-202ENST00000378307 PGA5P0DJD9 388 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 DBTP11182 482 aaKnown RBP12.68□□□□□ -0.38
RAB4B-202ENST00000378307 DEFB112Q30KQ8 113 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 ACP7Q6ZNF0 438 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 LHFPL3Q86UP9 236 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 ACBD7Q8N6N7 88 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 PNLDC1Q8NA58 520 aaKnown RBP12.68□□□□□ -0.38
RAB4B-202ENST00000378307 POC1AQ8NBT0 407 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 ZNRF1Q8ND25 227 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 ZNF671Q8TAW3 534 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 TRMT10AQ8TBZ6 339 aaKnown RBP12.68□□□□□ -0.38
RAB4B-202ENST00000378307 NPRL2Q8WTW4 380 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 TAF15Q92804 592 aaKnown RBP eCLIP12.68□□□□□ -0.38
RAB4B-202ENST00000378307 TMIGD2Q96BF3 282 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 DCTN5Q9BTE1 182 aa12.68□□□□□ -0.38
RAB4B-202ENST00000378307 CNTD2Q9H8S5 307 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms