RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 VEGFBP49765 207 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 SULT1A1P50225 295 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 FMODQ06828 376 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 MICBQ29980 383 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 ZAR1Q86SH2 424 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 HOGA1Q86XE5 327 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 CARFQ8N187 725 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 OR4A16Q8NH70 328 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 ZPLD1Q8TCW7 415 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 UTP23Q9BRU9 249 aaKnown RBP7.81□□□□□ -1.16
PCDH9-202ENST00000377865 SPTY2D1-AS1A0A0U1RR47 76 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 ZNF816-ZNF321PA0A0X1KG74 233 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 FABP4P15090 132 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 FAM3AP98173 230 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 IQCJQ1A5X6 159 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 ABHD17BQ5VST6 288 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 FDX2Q6P4F2 183 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 LCN15Q6UWW0 184 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 LDLRAD3Q86YD5 345 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 GCNT2Q8N0V5 402 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 LILRB1Q8NHL6 650 aaPredicted RBP7.8□□□□□ -1.16
PCDH9-202ENST00000377865 AQP3Q92482 292 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 CIB3Q96Q77 187 aaPredicted RBP7.8□□□□□ -1.16
PCDH9-202ENST00000377865 ADAM19Q9H013 955 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 ST3GAL6Q9Y274 331 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 PLXNA3P51805 1871 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 C3orf85A0A1B0GTC6 90 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 VSTM5A8MXK1 200 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 DEGS1O15121 323 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 DHHO43323 396 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 OR8B8Q15620 311 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 FHL5Q5TD97 284 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 ZNF611Q8N823 705 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 OR10AC1Q8NH08 325 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 OR4F5Q8NH21 305 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 GPR119Q8TDV5 335 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 HPSE2Q8WWQ2 592 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 LHX4Q969G2 390 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 BORCS7Q96B45 105 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 OR4F4Q96R69 305 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 RAB40CQ96S21 281 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 TUBG2Q9NRH3 451 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 CARHSP1Q9Y2V2 147 aaKnown RBP7.8□□□□□ -1.16
PCDH9-202ENST00000377865 hCG_1809904A0A1W2PP81 198 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 A0A1W2PR64 198 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 A0A1W2PRV1 198 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 HSPB6O14558 160 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 TERTO14746 1132 aaKnown RBP7.8□□□□□ -1.16
PCDH9-202ENST00000377865 FAHP16930 419 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 COX5AP20674 150 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 CD200P41217 278 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 HLA-DRB3P79483 266 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 OR2C3Q8N628 320 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 ATOH1Q92858 354 aaPredicted RBP7.8□□□□□ -1.16
PCDH9-202ENST00000377865 FAM210BQ96KR6 192 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 AQP10Q96PS8 301 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 SERTAD4Q9NUC0 356 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 CACFD1Q9UGQ2 172 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 A0A1W2PNR3 127 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 C4orf47A7E2U8 309 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 OPN1MWP04001 364 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 OPN1MW2P0DN77 364 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 OPN1MW3P0DN78 364 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 MUC1P15941 1255 aaPredicted RBP7.8□□□□□ -1.16
PCDH9-202ENST00000377865 IL24Q13007 206 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 OR2A2Q6IF42 318 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 BTNL8Q6UX41 500 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 RNF133Q8WVZ7 376 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 MIOXQ9UGB7 285 aa7.8□□□□□ -1.16
PCDH9-202ENST00000377865 TMEM229AB2RXF0 380 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 HYAL3O43820 417 aaPredicted RBP7.79□□□□□ -1.16
PCDH9-202ENST00000377865 ISG15P05161 165 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 FUT3P21217 361 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 ROM1Q03395 351 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 CD226Q15762 336 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 C1orf100Q5SVJ3 147 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 RTL8AQ9BWD3 113 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 IGHV3-20A0A0C4DH32 117 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 ARGFXA6NJG6 315 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 J3QRE1 110 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 BCAT2O15382 392 aaPredicted RBP7.79□□□□□ -1.16
PCDH9-202ENST00000377865 PTBP3O95758 552 aaKnown RBP7.79□□□□□ -1.16
PCDH9-202ENST00000377865 PDGFBP01127 241 aaPredicted RBP7.79□□□□□ -1.16
PCDH9-202ENST00000377865 RD3LP0DJH9 198 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 VSIG8P0DPA2 414 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 RAB4AP20338 218 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 GCH1P30793 250 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 ZNF260Q3ZCT1 412 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 NKAIN1Q4KMZ8 207 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 DMBX1Q8NFW5 382 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 AKR7LQ8NHP1 331 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 GABRG3Q99928 467 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 SLC26A1Q9H2B4 701 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 MRPS18BQ9Y676 258 aaKnown RBP7.79□□□□□ -1.16
PCDH9-202ENST00000377865 OTOFQ9HC10 1997 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 C20orf202A1L168 122 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 OR5AC1P0C628 307 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 CDAP32320 146 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 GPR3P46089 330 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 OR8G2PQ6IF36 304 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms